Debian Bug report logs -
#965319
mrbayes: please make the build reproducible
Reported by: "Chris Lamb" <lamby@debian.org>
Date: Sun, 19 Jul 2020 12:09:01 UTC
Severity: wishlist
Tags: patch
Found in version mrbayes/3.2.7a-3
Fixed in version mrbayes/3.2.7a-4
Done: Andreas Tille <tille@debian.org>
Bug is archived. No further changes may be made.
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Report forwarded
to debian-bugs-dist@lists.debian.org, reproducible-bugs@lists.alioth.debian.org, Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>:
Bug#965319; Package src:mrbayes.
(Sun, 19 Jul 2020 12:09:03 GMT) (full text, mbox, link).
Acknowledgement sent
to "Chris Lamb" <lamby@debian.org>:
New Bug report received and forwarded. Copy sent to reproducible-bugs@lists.alioth.debian.org, Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>.
(Sun, 19 Jul 2020 12:09:03 GMT) (full text, mbox, link).
Message #5 received at submit@bugs.debian.org (full text, mbox, reply):
[Message part 1 (text/plain, inline)]
Source: mrbayes
Version: 3.2.7a-3
Severity: wishlist
Tags: patch
User: reproducible-builds@lists.alioth.debian.org
Usertags: timestamps
X-Debbugs-Cc: reproducible-bugs@lists.alioth.debian.org
Hi,
Whilst working on the Reproducible Builds effort [0] we noticed that
mrbayes could not be built reproducibly.
This is because it ships a generated Makefile that contains various
non-deterministic paths. (You remove "Makefile.*" files, but not a
"Makefile") by itself.
Patch attached.
[0] https://reproducible-builds.org/
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` lamby@debian.org / chris-lamb.co.uk
`-
[mrbayes.diff.txt (text/plain, attachment)]
Reply sent
to Andreas Tille <tille@debian.org>:
You have taken responsibility.
(Mon, 20 Jul 2020 08:45:03 GMT) (full text, mbox, link).
Notification sent
to "Chris Lamb" <lamby@debian.org>:
Bug acknowledged by developer.
(Mon, 20 Jul 2020 08:45:03 GMT) (full text, mbox, link).
Message #10 received at 965319-close@bugs.debian.org (full text, mbox, reply):
Source: mrbayes
Source-Version: 3.2.7a-4
Done: Andreas Tille <tille@debian.org>
We believe that the bug you reported is fixed in the latest version of
mrbayes, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 965319@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated mrbayes package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Mon, 20 Jul 2020 09:50:56 +0200
Source: mrbayes
Architecture: source
Version: 3.2.7a-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Closes: 965319
Changes:
mrbayes (3.2.7a-4) unstable; urgency=medium
.
[ Chris Lamb ]
* Build reproducibly
Closes: #965319
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Bug archived.
Request was from Debbugs Internal Request <owner@bugs.debian.org>
to internal_control@bugs.debian.org.
(Sun, 23 Aug 2020 07:25:08 GMT) (full text, mbox, link).
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