Debian Bug report logs - #925191
toil: please make the build reproducible

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Package: src:toil; Maintainer for src:toil is Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>;

Reported by: "Chris Lamb" <lamby@debian.org>

Date: Thu, 21 Mar 2019 02:27:02 UTC

Severity: wishlist

Tags: fixed-upstream, patch

Found in version toil/3.18.0-2

Fixed in version toil/3.20.0-1

Done: michael.crusoe@gmail.com (Michael R. Crusoe)

Bug is archived. No further changes may be made.

Forwarded to https://github.com/DataBiosphere/toil/pull/2563

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Report forwarded to debian-bugs-dist@lists.debian.org, reproducible-bugs@lists.alioth.debian.org, Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>:
Bug#925191; Package src:toil. (Thu, 21 Mar 2019 02:27:05 GMT) (full text, mbox, link).


Acknowledgement sent to "Chris Lamb" <lamby@debian.org>:
New Bug report received and forwarded. Copy sent to reproducible-bugs@lists.alioth.debian.org, Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>. (Thu, 21 Mar 2019 02:27:05 GMT) (full text, mbox, link).


Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: "Chris Lamb" <lamby@debian.org>
To: submit@bugs.debian.org
Subject: toil: please make the build reproducible
Date: Wed, 20 Mar 2019 22:23:20 -0400
[Message part 1 (text/plain, inline)]
Source: toil
Version: 3.18.0-2
Severity: wishlist
Tags: patch
User: reproducible-builds@lists.alioth.debian.org
Usertags: timestamps
X-Debbugs-Cc: reproducible-bugs@lists.alioth.debian.org

Hi,

Whilst working on the Reproducible Builds effort [0], we noticed
that toil could not be built reproducibly.

This is because it embeds the current builddate via Python's
`datetime.datetime.utcnow().year`.

Patch attached.

 [0] https://reproducible-builds.org/


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby@debian.org / chris-lamb.co.uk
       `-
[toil.diff.txt (text/plain, attachment)]

Set Bug forwarded-to-address to 'https://github.com/DataBiosphere/toil/pull/2563'. Request was from "Chris Lamb" <lamby@debian.org> to control@bugs.debian.org. (Thu, 21 Mar 2019 02:48:03 GMT) (full text, mbox, link).


Information forwarded to debian-bugs-dist@lists.debian.org, Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>:
Bug#925191; Package src:toil. (Thu, 21 Mar 2019 02:54:02 GMT) (full text, mbox, link).


Acknowledgement sent to "Chris Lamb" <lamby@debian.org>:
Extra info received and forwarded to list. Copy sent to Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>. (Thu, 21 Mar 2019 02:54:02 GMT) (full text, mbox, link).


Message #12 received at 925191@bugs.debian.org (full text, mbox, reply):

From: "Chris Lamb" <lamby@debian.org>
To: 925191@bugs.debian.org
Cc: "Chris Lamb" <lamby@debian.org>
Subject: Re: toil: please make the build reproducible
Date: Wed, 20 Mar 2019 22:45:32 -0400
forwarded 925191 https://github.com/DataBiosphere/toil/pull/2563
thanks

I've forwarded this upstream here:

  https://github.com/DataBiosphere/toil/pull/2563


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby@debian.org / chris-lamb.co.uk
       `-



Added tag(s) fixed-upstream. Request was from debian-bts-link@lists.debian.org to control@bugs.debian.org. (Mon, 25 Mar 2019 19:46:01 GMT) (full text, mbox, link).


Reply sent to michael.crusoe@gmail.com (Michael R. Crusoe):
You have taken responsibility. (Sat, 24 Aug 2019 09:39:19 GMT) (full text, mbox, link).


Notification sent to "Chris Lamb" <lamby@debian.org>:
Bug acknowledged by developer. (Sat, 24 Aug 2019 09:39:19 GMT) (full text, mbox, link).


Message #19 received at 925191-close@bugs.debian.org (full text, mbox, reply):

From: michael.crusoe@gmail.com (Michael R. Crusoe)
To: 925191-close@bugs.debian.org
Subject: Bug#925191: fixed in toil 3.20.0-1
Date: Sat, 24 Aug 2019 09:36:53 +0000
Source: toil
Source-Version: 3.20.0-1

We believe that the bug you reported is fixed in the latest version of
toil, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 925191@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe <michael.crusoe@gmail.com> (supplier of updated toil package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Wed, 20 Mar 2019 21:46:34 -0500
Source: toil
Architecture: source
Version: 3.20.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <michael.crusoe@gmail.com>
Closes: 925191
Changes:
 toil (3.20.0-1) unstable; urgency=medium
 .
   [ Michael R. Crusoe ]
   * Make the build reproducible, patch from lamby@debian.org; thanks!
     (Closes: #925191)
   * Update the patches.
 .
   [ Andreas Tille ]
   * debhelper-compat 12
   * Point Vcs fields to salsa.debian.org
   * Standards-Version: 4.4.0
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 b7a24f8ad3a4da5cff60580308f135a30bb168d9 7320435 toil_3.20.0.orig.tar.gz
 a394adbff49084f383918c5bb57abfeebfc57c5f 12444 toil_3.20.0-1.debian.tar.xz
 3425fb046eabf8f5aaa76dab32c9cab3c7605e91 9042 toil_3.20.0-1_source.buildinfo
Checksums-Sha256:
 cdabc24a4239179dee014dc571e965b975d5c065f23f31b8dfb86afd36ae00c8 2122 toil_3.20.0-1.dsc
 3f38a18bbd585223a6aa4f721b47f8d19314d559d32413fe02061a22ce0694ce 7320435 toil_3.20.0.orig.tar.gz
 ae3a5f744fe8a8a96b5dc5809b117ecaf50b9c6874bfeebad5838e6e14dbaa42 12444 toil_3.20.0-1.debian.tar.xz
 7276bddf7f9e6b8d3f762854163727be8578c25dc83089c3c2036c1ffb208b3f 9042 toil_3.20.0-1_source.buildinfo
Files:
 c58192aeea2e08004f6f8714717aa1fc 2122 net optional toil_3.20.0-1.dsc
 581b13b626548194cfedd57779495ef4 7320435 net optional toil_3.20.0.orig.tar.gz
 63925d8b180828756b6aa40cfd8d463b 12444 net optional toil_3.20.0-1.debian.tar.xz
 4ea2baa2f40a6a4203eb86d5fa180fce 9042 net optional toil_3.20.0-1_source.buildinfo

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Bug archived. Request was from Debbugs Internal Request <owner@bugs.debian.org> to internal_control@bugs.debian.org. (Mon, 23 Sep 2019 07:47:32 GMT) (full text, mbox, link).


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