Debian Bug report logs - #910655
fast5: please make the build reproducible

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Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: Chris Lamb <lamby@debian.org>

To: submit@bugs.debian.org

Subject: fast5: please make the build reproducible

Date: Tue, 09 Oct 2018 12:03:32 +0100

[Message part 1 (text/plain, inline)]

Source: fast5
Version: 0.6.5-1
Severity: wishlist
Tags: patch
User: reproducible-builds@lists.alioth.debian.org
Usertags: buildpath
X-Debbugs-Cc: reproducible-bugs@lists.alioth.debian.org

Hi,

Whilst working on the Reproducible Builds effort [0], we noticed
that fast5 could not be built reproducibly.

This is because it ships example binaries under /usr/share/doc of
libfast5-dev. Patch attached that only installs the source code and
Makefile instead.

 [0] https://reproducible-builds.org/


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby@debian.org / chris-lamb.co.uk
       `-

[fast5.diff.txt (text/plain, attachment)]

Message #10 received at 910655-close@bugs.debian.org (full text, mbox, reply):

From: Andreas Tille <tille@debian.org>

To: 910655-close@bugs.debian.org

Subject: Bug#910655: fixed in fast5 0.6.5-2

Date: Tue, 09 Oct 2018 13:04:29 +0000

Source: fast5
Source-Version: 0.6.5-2

We believe that the bug you reported is fixed in the latest version of
fast5, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 910655@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated fast5 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 09 Oct 2018 14:34:41 +0200
Source: fast5
Binary: fast5 libfast5-dev python-fast5 python3-fast5
Architecture: source
Version: 0.6.5-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 fast5      - utilities for manipulating Oxford Nanopore Fast5 files
 libfast5-dev - library for reading Oxford Nanopore Fast5 files -- headers
 python-fast5 - library for reading Oxford Nanopore Fast5 files -- Python 2
 python3-fast5 - library for reading Oxford Nanopore Fast5 files -- Python 3
Closes: 910655
Changes:
 fast5 (0.6.5-2) unstable; urgency=medium
 .
   * Team upload.
   * Point Vcs fields to salsa.debian.org
   * Standards-Version: 4.2.1
   * Do not install example binaries to enable reproducible builds
     (thanks for the patch to Chris Lamb <lamby@debian.org>)
     Closes: #910655
   * Respect DEB_BUILD_OPTIONS in override_dh_auto_test
Checksums-Sha1:
 1eff322edc3ac21333d98fb4390fe40cad9e595b 2267 fast5_0.6.5-2.dsc
 ac63ee5535d2607263a00a151686ba9c4b41a7aa 4332 fast5_0.6.5-2.debian.tar.xz
Checksums-Sha256:
 a69701c5b5b1b8f328c8424b0888e444df4acac53d5f9971d68c706735a56784 2267 fast5_0.6.5-2.dsc
 034783926e41adff903252d1a39f55cbcc9667734a537ff5da9ac5c7183abc78 4332 fast5_0.6.5-2.debian.tar.xz
Files:
 702b82ab4597cdc5a8eda8a31e420e8e 2267 science optional fast5_0.6.5-2.dsc
 0dead61e5d4f9e7a343bc987f80ebb71 4332 science optional fast5_0.6.5-2.debian.tar.xz

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