Debian Bug report logs - #892459
simpleitk FTBFS on i386: BasicFilters.DiscreteGaussianImageFilter Failed

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Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: Adrian Bunk <bunk@debian.org>

To: Debian Bug Tracking System <submit@bugs.debian.org>

Subject: simpleitk FTBFS on i386:

Date: Fri, 09 Mar 2018 10:59:56 +0200

Source: simpleitk
Version: 1.0.1-1
Severity: important
Tags: patch

https://buildd.debian.org/status/fetch.php?pkg=simpleitk&arch=i386&ver=1.0.1-1&stamp=1520381876&raw=0

...
ImageCompare: image Root Mean Square (RMS) difference was 0.513965 which exceeds the tolerance of 0.5
...
99% tests passed, 1 tests failed out of 944

Total Test time (real) = 317.34 sec

The following tests FAILED:
	192 - BasicFilters.DiscreteGaussianImageFilter (Failed)
Errors while running CTest
Makefile:142: recipe for target 'test' failed
make[2]: *** [test] Error 8


If this difference caused by the x87 excess precision is an actual
problem, then the following fixes it (at some performance cost):

--- debian/rules.old	2018-03-08 21:48:48.665663810 +0000
+++ debian/rules	2018-03-09 08:27:40.121298252 +0000
@@ -1,8 +1,14 @@
 #!/usr/bin/make -f
 
+include /usr/share/dpkg/architecture.mk
+
 # Uncomment this to turn on verbose mode.
 #export DH_VERBOSE=1
 
+ifneq (,$(filter $(DEB_HOST_ARCH), i386))
+export DEB_CXXFLAGS_MAINT_APPEND=-ffloat-store
+endif
+
 export DEB_BUILD_MAINT_OPTIONS=hardening=+all
 
 BUILDDIR=$(CURDIR)/SimpleITK-build

Message #10 received at 892459-submitter@bugs.debian.org (full text, mbox, reply):

From: ghisvail@gmail.com

To: 892459-submitter@bugs.debian.org

Subject: Bug #892459 in simpleitk marked as pending

Date: Sun, 11 Mar 2018 16:25:24 +0000

Control: tag -1 pending

Hello,

Bug #892459 in simpleitk reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below, and you can check the diff of the fix at:

https://salsa.debian.org/med-team/simpleitk/commit/2b4c44a25df18be466153f632e54de382cd7a380

------------------------------------------------------------------------
Cherry-pick upstream fix for FTBFS on i386

Gbp-Dch: Short
Thanks: Adrian Bunk for reporting
Closes: #892459

------------------------------------------------------------------------

(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/892459

Message #17 received at 892459-close@bugs.debian.org (full text, mbox, reply):

From: Ghislain Antony Vaillant <ghisvail@gmail.com>

To: 892459-close@bugs.debian.org

Subject: Bug#892459: fixed in simpleitk 1.0.1-2

Date: Tue, 13 Mar 2018 17:50:17 +0000

Source: simpleitk
Source-Version: 1.0.1-2

We believe that the bug you reported is fixed in the latest version of
simpleitk, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 892459@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ghislain Antony Vaillant <ghisvail@gmail.com> (supplier of updated simpleitk package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 13 Mar 2018 09:08:40 +0000
Source: simpleitk
Binary: libsimpleitk1.0 libsimpleitk1-dev python3-simpleitk
Architecture: source
Version: 1.0.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Ghislain Antony Vaillant <ghisvail@gmail.com>
Description:
 libsimpleitk1-dev - development files for SimpleITK
 libsimpleitk1.0 - cross-platform image analysis toolkit
 python3-simpleitk - Python bindings for SimpleITK
Closes: 892459
Changes:
 simpleitk (1.0.1-2) unstable; urgency=medium
 .
   * Cherry-pick upstream fix for FTBFS on i386.
     Thanks to Adrian Bunk for reporting (Closes: #892459)
   * Point the VCS URIs to salsa.debian.org
   * Bump the debhelper version to 11
   * Bump the standards version to 4.1.3
   * Include the NOTICE file in binary packages
Checksums-Sha1:
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 a7e686a4e2fcc92935d43cf784904cd4daaa8c88 10996 simpleitk_1.0.1-2.debian.tar.xz
 36cee62d6151b063cb57263a9e95ad22258346a9 14188 simpleitk_1.0.1-2_source.buildinfo
Checksums-Sha256:
 9013287d1641a1a22f625a28248315267b193150b4c2dd2615067acfe1f89240 2555 simpleitk_1.0.1-2.dsc
 731529810de0fdcfaad83e6fa3d18ab28786b58c1b786f345274bd8e0b84ad32 10996 simpleitk_1.0.1-2.debian.tar.xz
 b3a2e780fc5676a4908646bde78fa44ecd2a5ed59e5736e41f5e461d374254f3 14188 simpleitk_1.0.1-2_source.buildinfo
Files:
 b31262d8f79f12b0a4bb7e4a499f18a6 2555 libs optional simpleitk_1.0.1-2.dsc
 3d0d9e71ab465a8d9122d8fb91623c92 10996 libs optional simpleitk_1.0.1-2.debian.tar.xz
 600993ba6301b5dbabd74bc6cd069a9e 14188 libs optional simpleitk_1.0.1-2_source.buildinfo

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