Debian Bug report logs - #890786
coils: Please provide autopkgtest

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Package: coils; Maintainer for coils is Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>;

Reported by: Andreas Tille <tille@debian.org>

Date: Sun, 18 Feb 2018 21:12:15 UTC

Severity: minor

Tags: newcomer

Fixed in version coils/2002-6

Done: Liubov Chuprikova <chuprikovalv@gmail.com>

Bug is archived. No further changes may be made.

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Report forwarded to debian-bugs-dist@lists.debian.org, Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>:
Bug#890786; Package coils. (Sun, 18 Feb 2018 21:12:17 GMT) (full text, mbox, link).


Acknowledgement sent to Andreas Tille <tille@debian.org>:
New Bug report received and forwarded. Copy sent to Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>. (Sun, 18 Feb 2018 21:12:17 GMT) (full text, mbox, link).


Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: Andreas Tille <tille@debian.org>
To: Debian Bug Tracking System <submit@bugs.debian.org>
Subject: coils: Please provide autopkgtest
Date: Sun, 18 Feb 2018 22:11:12 +0100
Package: coils
Severity: minor
Tags: newcomer

Please provide autopkgtest.


-- System Information:
Debian Release: 9.0
  APT prefers stable-updates
  APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: amd64 (x86_64)

Kernel: Linux 4.9.0-5-amd64 (SMP w/1 CPU core)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8), LANGUAGE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)



Information forwarded to debian-bugs-dist@lists.debian.org, Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>:
Bug#890786; Package coils. (Tue, 13 Mar 2018 20:42:03 GMT) (full text, mbox, link).


Message #8 received at 890786@bugs.debian.org (full text, mbox, reply):

From: Liubov Chuprikova <chuprikovalv@gmail.com>
To: Andreas Tille <andreas@an3as.eu>
Cc: "debian-med@lists.debian.org" <debian-med@lists.debian.org>
Subject: Re: Question about adding autopkgtest for coils (#890786)
Date: Tue, 13 Mar 2018 20:18:15 +0000
[Message part 1 (text/plain, inline)]
Sorry, I've just realized that I've forgotten to specify the subject.

вт, 13 мар. 2018 г. в 20:26, Liubov Chuprikova <chuprikovalv@gmail.com>:

> Hi Andreas,
>
> I have just added an autopkgtest to *coils* (commit
> <https://salsa.debian.org/med-team/coils/commit/83773ecf79f48c10b59f6c81d5892b2478c3da2b>).
> Could you, please,  take a look at it and help me with a few questions I
> have about the process:
>
>    1. I noticed that tests usually try to run a program using test data
>    from a package and check for errors. There was one in *coils*
>    available and I used it in my autopkgtest. Is it enough to check that
>    the program runs without errors or it would be preferable to check if the
>    output is correct (there is a sample output in *coil's* Readme)?
>    2. Was I right by indicating "Team upload" in *debian/changelog* or it
>    should be NMU?
>    3. What would be my next step? Should I find a sponsor?
>
> I would really appreciate any feedback you can give me.
>
> Thank you,
> Liubov
>
[Message part 2 (text/html, inline)]

Information forwarded to debian-bugs-dist@lists.debian.org, Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>:
Bug#890786; Package coils. (Tue, 13 Mar 2018 20:42:06 GMT) (full text, mbox, link).


Message #11 received at 890786@bugs.debian.org (full text, mbox, reply):

From: Andreas Tille <andreas@an3as.eu>
To: debian-med@lists.debian.org
Subject: Re: Question about adding autopkgtest for coils (#890786)
Date: Tue, 13 Mar 2018 21:39:18 +0100
Hi Liubov,

On Tue, Mar 13, 2018 at 08:18:15PM +0000, Liubov Chuprikova wrote:
>
> I have just added an autopkgtest to *coils* (commit
> <https://salsa.debian.org/med-team/coils/commit/83773ecf79f48c10b59f6c81d5892b2478c3da2b>).

Thanks a lot.

> Could you, please,  take a look at it and help me with a few questions I
> have about the process:
>
>    1. I noticed that tests usually try to run a program using test data
>    from a package and check for errors. There was one in *coils*
>    available and I used it in my autopkgtest.

Very sensible.

>    Is it enough to check that
>    the program runs without errors or it would be preferable to check if the
>    output is correct (there is a sample output in *coil's* Readme)?

We try to test as best as possible.  In other words: Comparing with a
known expected output would be better than just running the program.

>    2. Was I right by indicating "Team upload" in *debian/changelog* or it
>    should be NMU?

Team upload is perfect.

>    3. What would be my next step? Should I find a sponsor?

I'll sponsor the package once you implemented the comparison you
mentioned above.

> I would really appreciate any feedback you can give me.

Thanks a lot for your work on this test.  You have proven that you
understood how this works.  I commited another change with the commit
description

	Install run-unit-test in user visible doc directory to enable
        users reproducing the test on their local machine and add
        README.test to explain how this works.

That's cosmetics but I consider this an interesting feature for our
users.

Kind regards

      Andreas.

-- 
http://fam-tille.de





Reply sent to Liubov Chuprikova <chuprikovalv@gmail.com>:
You have taken responsibility. (Wed, 14 Mar 2018 10:21:04 GMT) (full text, mbox, link).


Notification sent to Andreas Tille <tille@debian.org>:
Bug acknowledged by developer. (Wed, 14 Mar 2018 10:21:04 GMT) (full text, mbox, link).


Message #16 received at 890786-close@bugs.debian.org (full text, mbox, reply):

From: Liubov Chuprikova <chuprikovalv@gmail.com>
To: 890786-close@bugs.debian.org
Subject: Bug#890786: fixed in coils 2002-6
Date: Wed, 14 Mar 2018 10:19:35 +0000
Source: coils
Source-Version: 2002-6

We believe that the bug you reported is fixed in the latest version of
coils, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 890786@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Liubov Chuprikova <chuprikovalv@gmail.com> (supplier of updated coils package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 13 Mar 2018 12:22:29 +0000
Source: coils
Binary: ncoils
Architecture: source
Version: 2002-6
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Liubov Chuprikova <chuprikovalv@gmail.com>
Description:
 ncoils     - coiled coil secondary structure prediction
Closes: 890786
Changes:
 coils (2002-6) unstable; urgency=low
 .
   [ Liubov Chuprikova ]
   * Team upload.
   * Fixed typo in override_dh_clean
   * Fix "Please provide autopkgtest" autopkgtest added
     (Closes: #890786)
 .
   [ Andreas Tille ]
   * Standards-Version: 4.1.3
   * debhelper 11
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 ff5c8b5f17bd990ba5da35cf67b59fd23ed719aa 10064 coils_2002-6.debian.tar.xz
 11e5c6f2147c6f2014bc5989e933528c3e7b3c3a 13253 coils_2002-6_source.buildinfo
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 d2f730c73feada044b998df3adb9bfe1736ab1ed33c2e6398cd3557cc777fa4c 1972 coils_2002-6.dsc
 347e8f75475a74b78e8d9464faa90861efa54261f8ba3f35a6cac5a67dc491bb 10064 coils_2002-6.debian.tar.xz
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Files:
 78e1e70aadfef6540b7d008385136a44 1972 science optional coils_2002-6.dsc
 6296d34310b897e3ed7ff1940c0be26a 10064 science optional coils_2002-6.debian.tar.xz
 c8150201e76da0300bb1a133a483011e 13253 science optional coils_2002-6_source.buildinfo

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Bug archived. Request was from Debbugs Internal Request <owner@bugs.debian.org> to internal_control@bugs.debian.org. (Sat, 21 Apr 2018 07:31:13 GMT) (full text, mbox, link).


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