Debian Bug report logs -
#888112
diffoscope: compare JSON files using Python jsondiff module
Reported by: Paul Wise <pabs@debian.org>
Date: Tue, 23 Jan 2018 13:45:01 UTC
Severity: wishlist
Found in version diffoscope/90
Fixed in version diffoscope/91
Done: Mattia Rizzolo <mattia@debian.org>
Bug is archived. No further changes may be made.
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Bug#888112; Package diffoscope.
(Tue, 23 Jan 2018 13:45:05 GMT) (full text, mbox, link).
Acknowledgement sent
to Paul Wise <pabs@debian.org>:
New Bug report received and forwarded. Copy sent to Reproducible builds folks <reproducible-builds@lists.alioth.debian.org>.
(Tue, 23 Jan 2018 13:45:05 GMT) (full text, mbox, link).
Message #5 received at submit@bugs.debian.org (full text, mbox, reply):
[Message part 1 (text/plain, inline)]
Package: diffoscope
Version: 90
Severity: wishlist
The Python jsondiff module allows comparing JSON files in a better way
than just comparing the plain text like diffoscope currently does.
The jsondiff command-line program outputs only the JSON attributes that
are different between the files, but the Python module probably allows
more advanced analyses.
If jsondiff doesn't prove useful or is hard to use, please pretty-print
JSON files by loading the JSON file into a Python object and call
json.dump() with the indent=4 parameter and then diff the text.
$ curl -s 'https://salsa.debian.org/api/v4/users/1' > 1
$ curl -s 'https://salsa.debian.org/api/v4/users/2' > 2
$ diffoscope 1 2
--- 1
+++ 2
@@ -1 +1 @@
-{"id":1,"name":"Administrator","username":"root","state":"active","avatar_url":"https://seccdn.libravatar.org/avatar/9a5dac7fca5fa69fcb4fa36b948ff766?s=80&d=identicon","web_url":"https://salsa.debian.org/root","created_at":"2017-12-17T12:04:05.482Z","bio":"","location":"","skype":"","linkedin":"","twitter":"","website_url":"","organization":""}
+{"id":2,"name":"Paul Martin","username":"pm","state":"active","avatar_url":"https://seccdn.libravatar.org/avatar/a0177f306e580e136af48558989f2782?s=80&d=identicon","web_url":"https://salsa.debian.org/pm","created_at":"2017-12-17T12:46:16.992Z","bio":null,"location":null,"skype":"","linkedin":"","twitter":"","website_url":"","organization":null}
$ jsondiff 1 2 ; echo
{"id": 2, "name": "Paul Martin", "username": "pm", "avatar_url": "https://seccdn.libravatar.org/avatar/a0177f306e580e136af48558989f2782?s=80&d=identicon", "web_url": "https://salsa.debian.org/pm", "created_at": "2017-12-17T12:46:16.992Z", "bio": null, "location": null, "organization": null}
--
bye,
pabs
https://wiki.debian.org/PaulWise
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Bug#888112; Package diffoscope.
(Tue, 23 Jan 2018 14:51:03 GMT) (full text, mbox, link).
Message #8 received at 888112@bugs.debian.org (full text, mbox, reply):
[Message part 1 (text/plain, inline)]
On Tue, Jan 23, 2018 at 09:41:18PM +0800, Paul Wise wrote:
> The Python jsondiff module allows comparing JSON files in a better way
> than just comparing the plain text like diffoscope currently does.
Actually, that's a problem.
Diffoscope has a json comparator, that works great, but it's failing for
your example:
> $ curl -s 'https://salsa.debian.org/api/v4/users/1' > 1
> $ curl -s 'https://salsa.debian.org/api/v4/users/2' > 2
mattia@warren /tmp % diffoscope --debug 1 2
2018-01-23 15:45:31 D: diffoscope.presenters.formats: Will generate the following formats: text
2018-01-23 15:45:31 D: diffoscope.main: Starting diffoscope 90
2018-01-23 15:45:31 D: diffoscope.locale: Normalising locale, timezone, etc.
2018-01-23 14:45:31 D: diffoscope.main: Starting comparison
2018-01-23 14:45:31 D: diffoscope.comparators: Loaded 63 comparator classes
2018-01-23 14:45:31 D: diffoscope.comparators.utils.specialize: Using TextFile for 1
2018-01-23 14:45:31 D: diffoscope.comparators.utils.specialize: Using TextFile for 2
2018-01-23 14:45:31 D: diffoscope.comparators.utils.compare: Comparing 1 (TextFile) and 2 (TextFile)
...
I.e. it's not recognizing them as json files.
If I simply rename them to 1.json and 2.json and run diffoscope on them:
mattia@warren /tmp % diffoscope --debug 1.json 2.json
2018-01-23 15:46:40 D: diffoscope.presenters.formats: Will generate the following formats: text
2018-01-23 15:46:40 D: diffoscope.main: Starting diffoscope 90
2018-01-23 15:46:40 D: diffoscope.locale: Normalising locale, timezone, etc.
2018-01-23 14:46:40 D: diffoscope.main: Starting comparison
2018-01-23 14:46:40 D: diffoscope.comparators: Loaded 63 comparator classes
2018-01-23 14:46:40 D: diffoscope.comparators.utils.specialize: Using JSONFile for 1.json
2018-01-23 14:46:40 D: diffoscope.comparators.utils.specialize: Using JSONFile for 2.json
2018-01-23 14:46:40 D: diffoscope.comparators.utils.compare: Comparing 1.json (JSONFile) and 2.json (JSONFile)
2018-01-23 14:46:40 D: diffoscope.comparators.utils.file: File.has_same_content: <<class 'abc.JSONFile'> 1.json> <<class 'abc.JSONFile'> 2.json>
2018-01-23 14:46:40 D: diffoscope.diff: Running diff -aU7 /tmp/tmpfpv5c6dm_diffoscope/fifo1 /tmp/tmpfpv5c6dm_diffoscope/fifo2
2018-01-23 14:46:40 D: diffoscope.diff: diff -aU7 /tmp/tmpfpv5c6dm_diffoscope/fifo1 /tmp/tmpfpv5c6dm_diffoscope/fifo2: returncode 1, parsed True
|##################################################################################################################################| 100% Time: 0:00:00
2018-01-23 14:46:40 D: diffoscope.presenters.formats: Generating 'text' output at '-'
--- 1.json
+++ 2.json
│ --- 1.json
├── +++ 2.json
│ @@ -1,16 +1,16 @@
│ {
│ - "avatar_url": "https://seccdn.libravatar.org/avatar/9a5dac7fca5fa69fcb4fa36b948ff766?s=80&d=identicon",
│ - "bio": "",
│ - "created_at": "2017-12-17T12:04:05.482Z",
│ - "id": 1,
│ + "avatar_url": "https://seccdn.libravatar.org/avatar/a0177f306e580e136af48558989f2782?s=80&d=identicon",
│ + "bio": null,
│ + "created_at": "2017-12-17T12:46:16.992Z",
│ + "id": 2,
│ "linkedin": "",
│ - "location": "",
│ - "name": "Administrator",
│ - "organization": "",
│ + "location": null,
│ + "name": "Paul Martin",
│ + "organization": null,
│ "skype": "",
│ "state": "active",
│ "twitter": "",
│ - "username": "root",
│ - "web_url": "https://salsa.debian.org/root",
│ + "username": "pm",
│ + "web_url": "https://salsa.debian.org/pm",
│ "website_url": ""
│ }
1 mattia@warren /tmp % :(
Which is arguably even much better than what you get from that jsondiff
command :)
FTR, it seems the only check used to decide whether a file is a json
file, is to look for a '.json' as a filename suffix (and I'm not sure we
can do much better without looking into the file, which is probably too
expensive a check).
--
regards,
Mattia Rizzolo
GPG Key: 66AE 2B4A FCCF 3F52 DA18 4D18 4B04 3FCD B944 4540 .''`.
more about me: https://mapreri.org : :' :
Launchpad user: https://launchpad.net/~mapreri `. `'`
Debian QA page: https://qa.debian.org/developer.php?login=mattia `-
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Bug#888112; Package diffoscope.
(Tue, 23 Jan 2018 23:51:06 GMT) (full text, mbox, link).
Acknowledgement sent
to Chris Lamb <lamby@debian.org>:
Extra info received and forwarded to list. Copy sent to Reproducible builds folks <reproducible-builds@lists.alioth.debian.org>.
(Tue, 23 Jan 2018 23:51:06 GMT) (full text, mbox, link).
Message #13 received at 888112@bugs.debian.org (full text, mbox, reply):
Hi Mattia & Paul,
> FTR, it seems the only check used to decide whether a file is a json
> file, is to look for a '.json' as a filename suffix (and I'm not sure we
> can do much better without looking into the file, which is probably too
> expensive a check).
I wonder how sensible it would be to, say, slurp the first 100 bytes and see
whether we start with a "{" (or some other heuristic) and, if so, try and
parse the file as JSON etc.
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` lamby@debian.org / chris-lamb.co.uk
`-
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Bug#888112; Package diffoscope.
(Wed, 24 Jan 2018 00:57:03 GMT) (full text, mbox, link).
Acknowledgement sent
to Paul Wise <pabs@debian.org>:
Extra info received and forwarded to list. Copy sent to Reproducible builds folks <reproducible-builds@lists.alioth.debian.org>.
(Wed, 24 Jan 2018 00:57:03 GMT) (full text, mbox, link).
Message #18 received at 888112@bugs.debian.org (full text, mbox, reply):
[Message part 1 (text/plain, inline)]
On Wed, 2018-01-24 at 05:16 +0530, Chris Lamb wrote:
> I wonder how sensible it would be to, say, slurp the first 100 bytes and see
> whether we start with a "{" (or some other heuristic) and, if so, try and
> parse the file as JSON etc.
I think it would make diffoscope very slightly more useful if it could
fill in the gaps in MIME type detection for this and other cases.
If it turns out to be too expensive then it could have an option.
--
bye,
pabs
https://wiki.debian.org/PaulWise
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Bug#888112; Package diffoscope.
(Wed, 24 Jan 2018 01:21:03 GMT) (full text, mbox, link).
Acknowledgement sent
to Chris Lamb <lamby@debian.org>:
Extra info received and forwarded to list. Copy sent to Reproducible builds folks <reproducible-builds@lists.alioth.debian.org>.
(Wed, 24 Jan 2018 01:21:03 GMT) (full text, mbox, link).
Message #23 received at 888112@bugs.debian.org (full text, mbox, reply):
Hi Paul,
> > I wonder how sensible it would be to, say, slurp the first 100 bytes and see
> > whether we start with a "{" (or some other heuristic) and, if so, try and
> > parse the file as JSON etc.
>
> I think it would make diffoscope very slightly more useful if it could
> fill in the gaps in MIME type detection for this and other cases.
https://anonscm.debian.org/git/reproducible/diffoscope.git/commit/?id=2a758d3d0205e934ed6dffebb5d6462b00fe590d
> If it turns out to be too expensive then it could have an option.
Mo' options, mo' problems :)
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` lamby@debian.org / chris-lamb.co.uk
`-
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Bug#888112; Package diffoscope.
(Wed, 24 Jan 2018 02:21:03 GMT) (full text, mbox, link).
Acknowledgement sent
to Paul Wise <pabs@debian.org>:
Extra info received and forwarded to list. Copy sent to Reproducible builds folks <reproducible-builds@lists.alioth.debian.org>.
(Wed, 24 Jan 2018 02:21:03 GMT) (full text, mbox, link).
Message #28 received at 888112@bugs.debian.org (full text, mbox, reply):
[Message part 1 (text/plain, inline)]
On Wed, 2018-01-24 at 06:47 +0530, Chris Lamb wrote:
> https://anonscm.debian.org/git/reproducible/diffoscope.git/commit/?id=2a758d3d0205e934ed6dffebb5d6462b00fe590d
That isn't going to work for UTF-8 JSON, I suggest using the MIME type
instead of the file type string.
$ curl -s 'https://salsa.debian.org/api/v4/users/1894' > user
$ file user
user: UTF-8 Unicode text, with very long lines, with no line terminators
$ file --mime-type user
user: text/plain
--
bye,
pabs
https://wiki.debian.org/PaulWise
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Bug#888112; Package diffoscope.
(Wed, 24 Jan 2018 02:33:06 GMT) (full text, mbox, link).
Acknowledgement sent
to Paul Wise <pabs@debian.org>:
Extra info received and forwarded to list. Copy sent to Reproducible builds folks <reproducible-builds@lists.alioth.debian.org>.
(Wed, 24 Jan 2018 02:33:06 GMT) (full text, mbox, link).
Message #33 received at 888112@bugs.debian.org (full text, mbox, reply):
[Message part 1 (text/plain, inline)]
On Wed, 2018-01-24 at 06:47 +0530, Chris Lamb wrote:
> https://anonscm.debian.org/git/reproducible/diffoscope.git/commit/?id=2a758d3d0205e934ed6dffebb5d6462b00fe590d
I would suggest also checking for '[' characters (from JSON arrays).
--
bye,
pabs
https://wiki.debian.org/PaulWise
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Bug#888112; Package diffoscope.
(Wed, 24 Jan 2018 02:48:03 GMT) (full text, mbox, link).
Acknowledgement sent
to Chris Lamb <lamby@debian.org>:
Extra info received and forwarded to list. Copy sent to Reproducible builds folks <reproducible-builds@lists.alioth.debian.org>.
(Wed, 24 Jan 2018 02:48:03 GMT) (full text, mbox, link).
Message #38 received at 888112@bugs.debian.org (full text, mbox, reply):
Hi pabs,
> That isn't going to work for UTF-8 JSON, I suggest using the MIME type
> instead of the file type string.
https://anonscm.debian.org/git/reproducible/diffoscope.git/commit/?id=f7ced27f52b974b8dac3354b3145637e3bc28f24
> I would suggest also checking for '[' characters (from JSON arrays).
https://anonscm.debian.org/git/reproducible/diffoscope.git/commit/?id=de1abeae19067539c8d45758e657634762589451
:)
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` lamby@debian.org / chris-lamb.co.uk
`-
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Bug#888112; Package diffoscope.
(Thu, 25 Jan 2018 01:18:03 GMT) (full text, mbox, link).
Acknowledgement sent
to Chris Lamb <lamby@debian.org>:
Extra info received and forwarded to list. Copy sent to Reproducible builds folks <reproducible-builds@lists.alioth.debian.org>.
(Thu, 25 Jan 2018 01:18:03 GMT) (full text, mbox, link).
Message #43 received at 888112@bugs.debian.org (full text, mbox, reply):
tags 888112 + pending
thanks
Fixed in Git:
https://anonscm.debian.org/git/reproducible/diffoscope.git/commit/?id=1b121ea4efdb9fc614d32172b9749b5dd4afc550
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` lamby@debian.org / chris-lamb.co.uk
`-
Added tag(s) pending.
Request was from Chris Lamb <lamby@debian.org>
to control@bugs.debian.org.
(Thu, 25 Jan 2018 01:18:05 GMT) (full text, mbox, link).
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Bug#888112; Package diffoscope.
(Thu, 25 Jan 2018 10:09:03 GMT) (full text, mbox, link).
Message #48 received at 888112@bugs.debian.org (full text, mbox, reply):
[Message part 1 (text/plain, inline)]
On Thu, Jan 25, 2018 at 06:45:36AM +0530, Chris Lamb wrote:
> https://anonscm.debian.org/git/reproducible/diffoscope.git/commit/?id=1b121ea4efdb9fc614d32172b9749b5dd4afc550
So this added a new build dependency, etc.
I've built the required backports, and uploaded them to DELAYED/10 so
that they will land to stretch-backports' NEW after they migrate to
testing (as python-jsondiff was accepted into unstable for the first
time only two days ago).
--
regards,
Mattia Rizzolo
GPG Key: 66AE 2B4A FCCF 3F52 DA18 4D18 4B04 3FCD B944 4540 .''`.
more about me: https://mapreri.org : :' :
Launchpad user: https://launchpad.net/~mapreri `. `'`
Debian QA page: https://qa.debian.org/developer.php?login=mattia `-
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Bug#888112; Package diffoscope.
(Thu, 25 Jan 2018 10:18:03 GMT) (full text, mbox, link).
Acknowledgement sent
to Chris Lamb <lamby@debian.org>:
Extra info received and forwarded to list. Copy sent to Reproducible builds folks <reproducible-builds@lists.alioth.debian.org>.
(Thu, 25 Jan 2018 10:18:03 GMT) (full text, mbox, link).
Message #53 received at 888112@bugs.debian.org (full text, mbox, reply):
Hi Mattia,
> So this added a new build dependency, etc.
> I've built the required backports, and uploaded them to DELAYED/10 so
> that they will land to stretch-backports' NEW after they migrate to
> testing
Ooh, great thinking! Thanks :)
Best wishes,
--
,''`.
: :' : Chris Lamb
`. `'` lamby@debian.org / chris-lamb.co.uk
`-
Reply sent
to Mattia Rizzolo <mattia@debian.org>:
You have taken responsibility.
(Thu, 01 Mar 2018 13:09:23 GMT) (full text, mbox, link).
Notification sent
to Paul Wise <pabs@debian.org>:
Bug acknowledged by developer.
(Thu, 01 Mar 2018 13:09:23 GMT) (full text, mbox, link).
Message #58 received at 888112-close@bugs.debian.org (full text, mbox, reply):
Source: diffoscope
Source-Version: 91
We believe that the bug you reported is fixed in the latest version of
diffoscope, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 888112@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Mattia Rizzolo <mattia@debian.org> (supplier of updated diffoscope package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Thu, 01 Mar 2018 13:40:48 +0100
Source: diffoscope
Binary: diffoscope
Architecture: source
Version: 91
Distribution: unstable
Urgency: medium
Maintainer: Reproducible builds folks <reproducible-builds@lists.alioth.debian.org>
Changed-By: Mattia Rizzolo <mattia@debian.org>
Description:
diffoscope - in-depth comparison of files, archives, and directories
Closes: 849386 863879 863880 877726 886736 886963 887180 888112 888401 888402 890528
Changes:
diffoscope (91) unstable; urgency=medium
.
[ Mattia Rizzolo ]
* d/clean: Remove .cache/.
* diff: Wrap long regular expression for improved readability.
* comparators.json: Fix UnicodeDecodeError with a non-UTF8 locale.
* d/copyright: Update for the new year.
* d/control: Bump Standards-Version to 4.1.3, no changes needed.
* tests/android:
+ Skip tests involving abootimg on BE archs (see #725729).
.
[ Daniel Shahaf ]
* diffoscope.diff: Document feeders. Closes: #863880
* Optimize the common case of feeders. Closes: #863879
.
[ Juliana Oliveira ]
* {tempfiles, utils.archive}: catch possible FileNotFoundError.
* comparators.java: add support for procyon-decompiler. Closes: #849386
* {command, feeders, diff}: replaces subprocess.Popen() by .run().
This is done in preparation for work on multiprocessing (#842837).
+ {command, zip, feeders}: replaces .wait by the new .returncode property.
+ comparators.utils.command: replaces .stderr_content by .stderr.
* tests:
+ test_progress: fix test case for some broken versions of
python-progressbar. Closes: #877726
+ utils.tools: add support for modules on skip_unless* annotations.
.
[ Chris Lamb ]
* comparators:
+ utils/compare:
- Show extended filesystem metadata even when directly comparing two
files, not just when we specify two directories. Closes: #888402
+ macho:
- If the If the LLVM disassembler does not work, try the
internal one. Closes: #886736
- Always strip the filename, not just when by itself.
+ json:
- Do some cheap fuzzy parsing to detect JSON files not named .json.
- Also match unicode JSON files.
- Optionally compare JSONs with the jsondiff module. Closes: #888112
+ directory:
- Report differences in extended file attributes when comparing files.
Closes: #888401
+ xsb:
- Add support for comparing XMLBeans binary schemas.
+ barkeley_db:
- Add support for comparing Berkeley DB files. Closes: #890528
* Misc code cleaup.
* tests:
+ comparators.test_elf: Return '0' if we can't parse the readelf
version number. Closes: #886963
* debian:
+ Explicitly build-depend and recommend e2fsprogs. Closes: #887180
.
[ Ximin Luo ]
* Partially revert the changes done for #888402 to maintain the current.
behaviour of --exclude-directory-metadata.
* Refactor how the configuration is loaded:
+ Move the defaults into a Config.reset() method.
+ reset() the configuration at the end of main(), to help the testsuite.
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