Debian Bug report logs - #866330
cd-hit: please make the build reproducible

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Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: Chris Lamb <lamby@debian.org>

To: submit@bugs.debian.org

Subject: cd-hit: please make the build reproducible

Date: Wed, 28 Jun 2017 22:25:33 +0100

[Message part 1 (text/plain, inline)]

Source: cd-hit
Version: 4.6.7-1
Severity: wishlist
Tags: patch
User: reproducible-builds@lists.alioth.debian.org
Usertags: buildpath
X-Debbugs-Cc: reproducible-bugs@lists.alioth.debian.org

Hi,

Whilst working on the Reproducible Builds effort [0], we noticed
that cd-hit could not be built reproducibly.

This is because the help2man call to cd-hit-div fails as it does not
support --help argument, and the error message contains the absolute
build path.

Patch attached. It adds a very basic "usage" stanza, thus fixing both
issues at once.

 [0] https://reproducible-builds.org/


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb, Debian Project Leader
     `. `'`      lamby@debian.org / chris-lamb.co.uk
       `-

[cd-hit.diff.txt (text/plain, attachment)]

Message #10 received at 866330-close@bugs.debian.org (full text, mbox, reply):

From: Sascha Steinbiss <satta@debian.org>

To: 866330-close@bugs.debian.org

Subject: Bug#866330: fixed in cd-hit 4.6.8-1

Date: Sat, 01 Jul 2017 09:34:54 +0000

Source: cd-hit
Source-Version: 4.6.8-1

We believe that the bug you reported is fixed in the latest version of
cd-hit, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 866330@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sascha Steinbiss <satta@debian.org> (supplier of updated cd-hit package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Sat, 01 Jul 2017 10:43:07 +0200
Source: cd-hit
Binary: cd-hit
Architecture: source amd64
Version: 4.6.8-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Sascha Steinbiss <satta@debian.org>
Description:
 cd-hit     - suite of programs designed to quickly group sequences
Closes: 866330
Changes:
 cd-hit (4.6.8-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream release.
   * Make build reproducible, thanks to Chris Lamb for the patch.
     Closes: #866330
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 bf9094ea7ca6f99f363b0273d6034e3d 1849964 debug extra cd-hit-dbgsym_4.6.8-1_amd64.deb
 7f3e835cdde39b01985f8964678c2a22 5317 science optional cd-hit_4.6.8-1_amd64.buildinfo
 76751e5e48710f8383f3b5dc32e05bf3 516992 science optional cd-hit_4.6.8-1_amd64.deb

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