Debian Bug report logs - #862484
seqan2: please make the build reproducible

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Package: src:seqan2; Maintainer for src:seqan2 is Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>;

Reported by: Chris Lamb <lamby@debian.org>

Date: Sat, 13 May 2017 13:45:01 UTC

Severity: wishlist

Tags: patch

Found in version seqan2/2.3.1+dfsg-3

Fixed in version seqan2/2.3.1+dfsg-5

Done: Sascha Steinbiss <satta@debian.org>

Bug is archived. No further changes may be made.

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Report forwarded to debian-bugs-dist@lists.debian.org, reproducible-bugs@lists.alioth.debian.org, Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>:
Bug#862484; Package src:seqan2. (Sat, 13 May 2017 13:45:04 GMT) (full text, mbox, link).


Acknowledgement sent to Chris Lamb <lamby@debian.org>:
New Bug report received and forwarded. Copy sent to reproducible-bugs@lists.alioth.debian.org, Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>. (Sat, 13 May 2017 13:45:04 GMT) (full text, mbox, link).


Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: Chris Lamb <lamby@debian.org>
To: submit@bugs.debian.org
Subject: seqan2: please make the build reproducible
Date: Sat, 13 May 2017 14:43:40 +0100
[Message part 1 (text/plain, inline)]
Source: seqan2
Version: 2.3.1+dfsg-3
Severity: wishlist
Tags: patch
User: reproducible-builds@lists.alioth.debian.org
Usertags: environment
X-Debbugs-Cc: reproducible-bugs@lists.alioth.debian.org

Hi,

Whilst working on the Reproducible Builds effort [0], we noticed
that seqan2 could not be built reproducibly due to including the
number of processors on the build machine in the manpage.

Patch attached.

 [0] https://reproducible-builds.org/


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby@debian.org / chris-lamb.co.uk
       `-
[seqan2.diff.txt (text/plain, attachment)]

Reply sent to Sascha Steinbiss <satta@debian.org>:
You have taken responsibility. (Wed, 05 Jul 2017 06:57:19 GMT) (full text, mbox, link).


Notification sent to Chris Lamb <lamby@debian.org>:
Bug acknowledged by developer. (Wed, 05 Jul 2017 06:57:19 GMT) (full text, mbox, link).


Message #10 received at 862484-close@bugs.debian.org (full text, mbox, reply):

From: Sascha Steinbiss <satta@debian.org>
To: 862484-close@bugs.debian.org
Subject: Bug#862484: fixed in seqan2 2.3.1+dfsg-5
Date: Wed, 05 Jul 2017 06:54:53 +0000
Source: seqan2
Source-Version: 2.3.1+dfsg-5

We believe that the bug you reported is fixed in the latest version of
seqan2, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 862484@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sascha Steinbiss <satta@debian.org> (supplier of updated seqan2 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 04 Jul 2017 23:24:52 +0200
Source: seqan2
Binary: seqan-apps libseqan2-dev
Architecture: source all amd64
Version: 2.3.1+dfsg-5
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Sascha Steinbiss <satta@debian.org>
Description:
 libseqan2-dev - C++ library for the analysis of biological sequences (development
 seqan-apps - C++ library for the analysis of biological sequences
Closes: 862484
Changes:
 seqan2 (2.3.1+dfsg-5) unstable; urgency=medium
 .
   * Team upload.
   * Make build reproducible.
     Thanks to Chris Lamb for the patch.
     Closes: #862484
Checksums-Sha1:
 5556d0e431c52004416bcde4ec2f9eb194c123cf 2095 seqan2_2.3.1+dfsg-5.dsc
 7cafbf940034878827464df2d4cf478fb59fd537 11204 seqan2_2.3.1+dfsg-5.debian.tar.xz
 f02ead006beddf08fb5d7e6418df8568382f0227 1171726 libseqan2-dev_2.3.1+dfsg-5_all.deb
 2b27b32b0c0bc53c4229936b6fb943717c961878 173407324 seqan-apps-dbgsym_2.3.1+dfsg-5_amd64.deb
 cc00eb0078d9fe7e47b1df62ffd7542beb781172 11451170 seqan-apps_2.3.1+dfsg-5_amd64.deb
 ae977cc0b9d6cbdf9e2066816ecc0b5903284d4c 11838 seqan2_2.3.1+dfsg-5_amd64.buildinfo
Checksums-Sha256:
 2188fa713a98fa49dd58c25574d268c79a315e5f197a3c1b9c32ca0e64320587 2095 seqan2_2.3.1+dfsg-5.dsc
 b1bda0d06ddd3f03bcfab2e9d77c2c0425dcc3ef51b6431e134e3ca32d418e16 11204 seqan2_2.3.1+dfsg-5.debian.tar.xz
 abcde5aca8a621674bd75a50ce6c77df132c92db3fee13f36a724a267b771d01 1171726 libseqan2-dev_2.3.1+dfsg-5_all.deb
 f442665222ead4e8aea7d3154627be3e0fb8a9d4cf3a52e768f887d1584523a3 173407324 seqan-apps-dbgsym_2.3.1+dfsg-5_amd64.deb
 496be2f320f8877e3488be427d7dcf6eaaa1b030ae31667c87d3cfe1109cf7d5 11451170 seqan-apps_2.3.1+dfsg-5_amd64.deb
 e205a8bca4705785492ee8c7b66f0351d98c350d7820c9b80bab459b576bc3ff 11838 seqan2_2.3.1+dfsg-5_amd64.buildinfo
Files:
 c4fcf24ec2832779b530d3f7a78458b0 2095 science optional seqan2_2.3.1+dfsg-5.dsc
 c559355effb476a1c6d77e1ffb8e2acd 11204 science optional seqan2_2.3.1+dfsg-5.debian.tar.xz
 3c7905e6d99b4c813ac68577c4a9cb59 1171726 libdevel optional libseqan2-dev_2.3.1+dfsg-5_all.deb
 bf86f3eb6ba23e4c3ceb49dbdf9b714c 173407324 debug extra seqan-apps-dbgsym_2.3.1+dfsg-5_amd64.deb
 b5994c5a9702e3898c96f3f3570da569 11451170 science optional seqan-apps_2.3.1+dfsg-5_amd64.deb
 562fb74e2ce5bebb991f954fb68dfec0 11838 science optional seqan2_2.3.1+dfsg-5_amd64.buildinfo

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Bug archived. Request was from Debbugs Internal Request <owner@bugs.debian.org> to internal_control@bugs.debian.org. (Wed, 02 Aug 2017 07:30:00 GMT) (full text, mbox, link).


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