Debian Bug report logs - #855480
examl: FTBFS with bash as /bin/sh

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Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: Chris Lamb <lamby@debian.org>

To: submit@bugs.debian.org

Subject: examl: FTBFS with bash as /bin/sh

Date: Sun, 19 Feb 2017 11:15:08 +1300

[Message part 1 (text/plain, inline)]

Source: examl
Version: 3.0.18-1
Severity: serious
Tags: patch
Justification: fails to build from source
User: reproducible-builds@lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-bugs@lists.alioth.debian.org

Dear Maintainer,

examl fails to build from source in unstable/amd64 when 
/bin/sh is set to bash:

  […]

  dh_auto_clean
  for mfile in Makefile.AVX.gcc Makefile.OMP.AVX.gcc Makefile.OMP.SSE3.gcc Makefile.SSE3.gcc; do /usr/bin/make --directory=examl -f ${mfile} clean ; done
  make[2]: Entering directory '«BUILDDIR»/examl'
  rm -f *.o examl-AVX
  make[2]: Leaving directory '«BUILDDIR»/examl'
  make[2]: Entering directory '«BUILDDIR»/examl'
  rm -f *.o examl-OMP-AVX
  make[2]: Leaving directory '«BUILDDIR»/examl'
  make[2]: Entering directory '«BUILDDIR»/examl'
  rm -f *.o examl-OMP
  make[2]: Leaving directory '«BUILDDIR»/examl'
  make[2]: Entering directory '«BUILDDIR»/examl'
  rm -f *.o examl
  make[2]: Leaving directory '«BUILDDIR»/examl'
  /usr/bin/make --directory=parser -f Makefile.SSE3.gcc clean ; done
  /bin/sh: -c: line 0: syntax error near unexpected token `done'
  /bin/sh: -c: line 0: `/usr/bin/make --directory=parser -f Makefile.SSE3.gcc clean ; done'
  debian/rules:15: recipe for target 'override_dh_auto_clean' failed
  make[1]: *** [override_dh_auto_clean] Error 1
  make[1]: Leaving directory '«BUILDDIR»'
  debian/rules:12: recipe for target 'clean' failed
  make: *** [clean] Error 2
  dpkg-buildpackage: error: fakeroot debian/rules clean gave error exit status 2

  […]

Patch attached.


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby@debian.org / chris-lamb.co.uk
       `-

[examl.3.0.18-1.unstable.amd64.log.txt.gz (application/octet-stream, attachment)]

[examl.diff.txt (text/plain, attachment)]

Message #12 received at 855480-close@bugs.debian.org (full text, mbox, reply):

From: Andreas Tille <tille@debian.org>

To: 855480-close@bugs.debian.org

Subject: Bug#855480: fixed in examl 3.0.18-2

Date: Wed, 22 Feb 2017 11:33:50 +0000

Source: examl
Source-Version: 3.0.18-2

We believe that the bug you reported is fixed in the latest version of
examl, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 855480@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated examl package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Wed, 22 Feb 2017 12:06:12 +0100
Source: examl
Binary: examl
Architecture: source amd64
Version: 3.0.18-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 examl      - Exascale Maximum Likelihood (ExaML) code for phylogenetic inferen
Closes: 855430 855480
Changes:
 examl (3.0.18-2) unstable; urgency=medium
 .
   * Fix cut-n-pasto in d/rules (thanks for the patch to Chris Lamb
     <lamby@debian.org>)
     Closes: #855480
   * Restrict build to intel architectures
     Closes: #855430
Checksums-Sha1:
 c01a5e5b0890bc876ad43358e4353e22bdc82ef6 2052 examl_3.0.18-2.dsc
 59e14491a6233c7e96a6594a9d70c31e96905e64 7588 examl_3.0.18-2.debian.tar.xz
 4c6c7e3c04d3e4824ad806c8d085abc77bcb0d65 1311064 examl-dbgsym_3.0.18-2_amd64.deb
 8a1ef255ccc7727f96de413707f2619b8d1daae3 5377 examl_3.0.18-2_amd64.buildinfo
 98438e8400280f66c0eb1bc7a3d7d115df2b1508 963886 examl_3.0.18-2_amd64.deb
Checksums-Sha256:
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 b82cefbfd2a25a7175c81aee9aea17a02dc601e18e7ffbd27cfede268801f7a8 7588 examl_3.0.18-2.debian.tar.xz
 930e777cbeb64e3e0b256ea497da3f9d5d0acb4adcea3287bda8e0f4126082e5 1311064 examl-dbgsym_3.0.18-2_amd64.deb
 fd53dab742f05043e98fec4c2ddc5c3d4412d4c6974ed3938ec7396ead6931a5 5377 examl_3.0.18-2_amd64.buildinfo
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Files:
 4a313e67c25d8be8d4b55c9325b32021 2052 science optional examl_3.0.18-2.dsc
 cc1d1d6a99f4b5c506edfa569596d395 7588 science optional examl_3.0.18-2.debian.tar.xz
 e037f64d55eff6c493aa65521d84cfbb 1311064 debug extra examl-dbgsym_3.0.18-2_amd64.deb
 ab225322d6ac2e3bfb58cda208dba211 5377 science optional examl_3.0.18-2_amd64.buildinfo
 c21b7a0aaf22be4c540cfcb7175ff817 963886 science optional examl_3.0.18-2_amd64.deb

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