Debian Bug report logs - #828065
hmmer2: please make the build reproducible

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Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: Chris Lamb <lamby@debian.org>

To: submit@bugs.debian.org

Subject: hmmer2: please make the build reproducible

Date: Fri, 24 Jun 2016 16:17:50 +0100

[Message part 1 (text/plain, inline)]

Source: hmmer2
Version: 2.3.2-10
Severity: wishlist
Tags: patch
User: reproducible-builds@lists.alioth.debian.org
Usertags: randomness
X-Debbugs-Cc: reproducible-builds@lists.alioth.debian.org

Hi,

Whilst working on the "reproducible builds" effort [0], we noticed that hmmer2 could not be built reproducibly.

Patch attached.

 [0] https://wiki.debian.org/ReproducibleBuilds


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby@debian.org / chris-lamb.co.uk
       `-

[hmmer2.diff.txt (application/octet-stream, attachment)]

Message #10 received at 828065-close@bugs.debian.org (full text, mbox, reply):

From: Sascha Steinbiss <satta@debian.org>

To: 828065-close@bugs.debian.org

Subject: Bug#828065: fixed in hmmer2 2.3.2-11

Date: Fri, 24 Jun 2016 16:39:40 +0000

Source: hmmer2
Source-Version: 2.3.2-11

We believe that the bug you reported is fixed in the latest version of
hmmer2, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 828065@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sascha Steinbiss <satta@debian.org> (supplier of updated hmmer2 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Fri, 24 Jun 2016 15:22:40 +0000
Source: hmmer2
Binary: hmmer2 hmmer2-pvm hmmer2-doc
Architecture: source amd64 all
Version: 2.3.2-11
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Sascha Steinbiss <satta@debian.org>
Description:
 hmmer2     - profile hidden Markov models for protein sequence analysis
 hmmer2-doc - profile hidden Markov models for protein sequence analysis (docs)
 hmmer2-pvm - HMMER programs with PVM (Parallel Virtual Machine) support
Closes: 828065
Changes:
 hmmer2 (2.3.2-11) unstable; urgency=medium
 .
   * Team upload.
   * Make build reproducible. Thanks to Chris Lamb for the patch.
     Closes: #828065
Checksums-Sha1:
 c5ece7bdc62eada6e15864fc5f3c4dedc0d28a7d 2081 hmmer2_2.3.2-11.dsc
 a8cacc8db47dd782bf4e8f6b50aa16dd845050ec 10068 hmmer2_2.3.2-11.debian.tar.xz
 a4a836d092f1c192a65a648675855c94a3515e32 2199036 hmmer2-dbgsym_2.3.2-11_amd64.deb
 2ce8fd3b321104572299c0565c1014d34438268f 85784 hmmer2-doc_2.3.2-11_all.deb
 ffd852cc2bfd7d6231bd4af269b157da0a9388bc 719788 hmmer2-pvm-dbgsym_2.3.2-11_amd64.deb
 5d77a954283eaeefb8692cc639f908783665d7cc 152328 hmmer2-pvm_2.3.2-11_amd64.deb
 0dd9240ddfebe2c0270f9bdef09ba1ccc0ea8146 2589828 hmmer2_2.3.2-11_amd64.deb
Checksums-Sha256:
 ee0c9ee09fca8fb32a8b7d6f0c2e1b512e993b26ecb73e6b18d2a0b2df96e701 2081 hmmer2_2.3.2-11.dsc
 7b5ec56ee8a6ea42c89a01a05fc74f2ddf15536e46bc8c52b414fe4c7a7235bb 10068 hmmer2_2.3.2-11.debian.tar.xz
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 7dbdbe4157732d3276a339979c4a2898703e274fe690e92e36774d44ed344b67 2589828 hmmer2_2.3.2-11_amd64.deb
Files:
 e34813bb787c3bce91e9cbffd3ecb44c 2081 science optional hmmer2_2.3.2-11.dsc
 84bd5381e59bf420117bfe4554db68a1 10068 science optional hmmer2_2.3.2-11.debian.tar.xz
 1adaca9fe050aac61316db44faef9167 2199036 debug extra hmmer2-dbgsym_2.3.2-11_amd64.deb
 4ece4df1127b2be797a2df7397bf4462 85784 doc optional hmmer2-doc_2.3.2-11_all.deb
 2e88b335b1e30cc490be6d7d2f960a63 719788 debug extra hmmer2-pvm-dbgsym_2.3.2-11_amd64.deb
 9c19da218086380dd936c0ed708e1d0d 152328 science optional hmmer2-pvm_2.3.2-11_amd64.deb
 702dca338f2dcf84cf2ee267e92deb15 2589828 science optional hmmer2_2.3.2-11_amd64.deb

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