Debian Bug report logs - #809058
seqan: please make the build reproducible

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Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: Chris Lamb <lamby@debian.org>

To: submit@bugs.debian.org

Subject: seqan: please make the build reproducible

Date: Sat, 26 Dec 2015 19:16:14 +0000

[Message part 1 (text/plain, inline)]

Source: seqan
Version: 1.4.1+dfsg-2
Severity: wishlist
Tags: patch
User: reproducible-builds@lists.alioth.debian.org
Usertags: timestamps
X-Debbugs-Cc: reproducible-builds@lists.alioth.debian.org

Hi,

Whilst working on the "reproducible builds" effort [0], we noticed that seqan could not be built reproducibly.

Patch attached.

 [0] https://wiki.debian.org/ReproducibleBuilds


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby@debian.org / chris-lamb.co.uk
       `-

[seqan.diff.txt (text/plain, attachment)]

Message #10 received at 809058@bugs.debian.org (full text, mbox, reply):

From: Michael Crusoe <michael.crusoe@gmail.com>

To: 809058@bugs.debian.org

Subject: Re: [Debian-med-packaging] Bug#809058: seqan: please make the build reproducible

Date: Wed, 20 Jan 2016 10:56:19 +0000

[Message part 1 (text/plain, inline)]

Control: forwarded 809058 https://github.com/seqan/seqan/issues/1344

I've reported this upstream; though I haven't checked to see if this issue
is present in their current release (v2.0.1)
-- 
Michael R. Crusoe     CWL Community Engineer     crusoe@ucdavis.edu
<mcrusoe@msu.edu>
Common Workflow Language project    University of California, Davis
https://impactstory.org/MichaelRCrusoe http://twitter.com/biocrusoe

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Message #19 received at 809058-close@bugs.debian.org (full text, mbox, reply):

From: Andreas Tille <tille@debian.org>

To: 809058-close@bugs.debian.org

Subject: Bug#809058: fixed in seqan 1.4.2+dfsg-1

Date: Tue, 02 Aug 2016 22:17:13 +0000

Source: seqan
Source-Version: 1.4.2+dfsg-1

We believe that the bug you reported is fixed in the latest version of
seqan, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 809058@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated seqan package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Tue, 02 Aug 2016 15:58:06 +0200
Source: seqan
Binary: seqan-dev
Architecture: source all
Version: 1.4.2+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 seqan-dev  - C++ library for the analysis of biological sequences (development
Closes: 766741 809058 811841 816988 818088
Changes:
 seqan (1.4.2+dfsg-1) unstable; urgency=medium
 .
   [Andreas Tille]
   * New upstream version
     Closes: #766741
   * Moved packaging to Git
   * Adapt watch file to fetch only seqan 1.x series
   * Update list of uploaders
   * Add compression option to watch file
   * Remove extras and core/apps from upstream source since these will be taken
     from seqan2 series (when doing so remove other unneeded stuff and binary
     files)
   * Add README.source to explain removals
   * Moved debian/upstream to debian/upstream/metadata
   * Drop documentation since developers should rather use seqan2
     Closes: #816988, #809058
   * Install cmake files
     Closes: #818088
 .
   [Gert Wollny]
   * d/rules: Add -DNDEBUG to CXXFLAGS, Closes: #811841
   * d/rules: enable parallel build
Checksums-Sha1:
 cf0f703821f42a32a85aebb93744cd71d7d57e90 2059 seqan_1.4.2+dfsg-1.dsc
 15b1150582ecbba675dec35793986a15d2c5c32b 9175900 seqan_1.4.2+dfsg.orig.tar.xz
 d9048975034c2c60a88b7898787b24b114e0deae 7148 seqan_1.4.2+dfsg-1.debian.tar.xz
 23c8bd11065c9eaea312d2ce753a2036f298c848 1097160 seqan-dev_1.4.2+dfsg-1_all.deb
Checksums-Sha256:
 3804c52a674ddfb499e4dd298c674531a7cabf093c64a9ef99e9e5930400e6f4 2059 seqan_1.4.2+dfsg-1.dsc
 ec6ce16748b4eefac79e9e72d3af45175ac57ce883f933a8a4873a6975f7c5e5 9175900 seqan_1.4.2+dfsg.orig.tar.xz
 f67a68fdd6b9e025e5388aecb9230bb374abe4d54daf83df50fa342cf0b5e5b6 7148 seqan_1.4.2+dfsg-1.debian.tar.xz
 053be6ca2b664f1b68293e4ad67f00199469c7a315cdd4300a10ed025dbda830 1097160 seqan-dev_1.4.2+dfsg-1_all.deb
Files:
 95db084da2056c90b1412b04fdf9d0f3 2059 science optional seqan_1.4.2+dfsg-1.dsc
 57c743c6d788509e3e19cd9b75ae38b9 9175900 science optional seqan_1.4.2+dfsg.orig.tar.xz
 72bda9f7a4ecd4e21f95e693bfffc4f2 7148 science optional seqan_1.4.2+dfsg-1.debian.tar.xz
 052c3ff94fd682373ec1092b2a24231e 1097160 libdevel optional seqan-dev_1.4.2+dfsg-1_all.deb

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