Package: libscotchmetis-dev; Maintainer for libscotchmetis-dev is Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>; Source for libscotchmetis-dev is src:scotch (PTS, buildd, popcon).
Reported by: David Steele <steele@debian.org>
Date: Sat, 6 Jul 2013 05:30:22 UTC
Severity: normal
Found in version scotch/5.1.12b.dfsg-2
Fixed in version scotch/5.1.12b.dfsg-2.1
Done: Andreas Beckmann <anbe@debian.org>
Bug is archived. No further changes may be made.
View this report as an mbox folder, status mbox, maintainer mbox
Report forwarded
to Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>:
Bug#715112; Package libscotchmetis-dev.
(Sat, 06 Jul 2013 05:30:27 GMT) (full text, mbox, link).
Acknowledgement sent
to David Steele <dsteele@gmail.com>:
New Bug report received and forwarded. Copy sent to Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>.
(Sat, 06 Jul 2013 05:30:27 GMT) (full text, mbox, link).
Message #5 received at maintonly@bugs.debian.org (full text, mbox, reply):
Package: libscotchmetis-dev
Version: 5.1.12b.dfsg-2
Severity: serious
User: debian-qa@lists.debian.org
Usertags: piuparts, broken-symlink, broken-symlink-shared-library
Hi,
During a test with piuparts, I noticed your package is
responsible for the presence of broken symlinks involving
a shared library. Such failures may indicate a significant
problem with the package.
Usually this is caused by a missing Depends. It may also be
triggered if a Recommended or reverse dependency package
owning the symlink target file is not yet installed. This type
of failure mode needs to be eliminated so that other symlink
problems become more visible. In this case, the problem can be
resolved by creating a trigger for the target file. See the
dpkg triggers documentation[1] and an example on the net[2] for
implementation details.
This is being filed as Serious because it represents a violation
of Policy. Section 8 states "Packages containing shared
libraries must be constructed with a little care to make sure
that the shared library is always available".
A link to the log containing the indicated broken symlinks can
be found on piuparts.debian.org[3]. Search for "Warn: Broken
Symlinks" to see the failure point. A log showing the broken
symlink as an error is appended.
The log contains the following broken symlinks:
/usr/lib/metis-int64/libmetis.a
-> libscotchmetis.a
/usr/lib/metis-int64/libmetis.so
-> libscotchmetis.so
/usr/lib/metis-int32/libmetis.a
-> libscotchmetis.a
/usr/lib/metis-int32/libmetis.so
-> libscotchmetis.so
/usr/lib/metis-long/libmetis.a
-> libscotchmetis.a
/usr/lib/metis-long/libmetis.so
-> libscotchmetis.so
[1] - file:///usr/share/doc/dpkg-dev/triggers.txt.gz
[2] - http://www.seanius.net/blog/2009/09/dpkg-triggers-howto/
[3] - http://piuparts.debian.org/sid/broken_symlinks_issue.html
----------
Start: 2013-07-05 21:53:45 EST
Package: libscotchmetis-dev
Source: scotch
Version: 5.1.12b.dfsg-2
Installed-Size: 123
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Architecture: amd64
Replaces: libmetis-dev
Depends: libscotch-dev (= 5.1.12b.dfsg-2)
Conflicts: libmetis-dev, libparmetis-dev
Description: programs and libraries for graph, mesh and hypergraph partitioning
Homepage: http://www.labri.fr/perso/pelegrin/scotch/
Description-md5: a391c720b80b18263009a2efcd3d5429
Tag: devel::library, role::devel-lib
Section: libdevel
Priority: extra
Filename: pool/main/s/scotch/libscotchmetis-dev_5.1.12b.dfsg-2_amd64.deb
Size: 30840
MD5sum: 8c5b4b42cc6fdf68950a7a4b4a0ee0c4
SHA1: fe78872ce19e8b274db1bda147cf02d4c499d71d
SHA256: ae5e7ff3a12dc983023de8a79f6d1ec5e07de9adcc54a526aa494dec8a7ee8ed
Executing: sudo piuparts --scriptsdir /etc/piuparts/scripts --skip-logrotatefiles-test --warn-on-others --fail-on-broken-symlinks --mirror http://127.0.0.1/debian --tmpdir /var/tmp --arch amd64 -b /var/cache/piuparts/basetgz/sid.tar.gz -d sid --no-upgrade-test --apt libscotchmetis-dev=5.1.12b.dfsg-2
0m0.0s INFO: ------------------------------------------------------------------------------
0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile.
0m0.0s INFO: FAQ available at http://wiki.debian.org/piuparts/FAQ
0m0.0s INFO: ------------------------------------------------------------------------------
0m0.0s INFO: piuparts version 0.54~201306172307~0.53-14-ge8900a0 starting up.
0m0.0s INFO: Command line arguments: '/usr/sbin/piuparts' '--scriptsdir' '/etc/piuparts/scripts' '--skip-logrotatefiles-test' '--warn-on-others' '--fail-on-broken-symlinks' '--mirror' 'http://127.0.0.1/debian' '--tmpdir' '/var/tmp' '--arch' 'amd64' '-b' '/var/cache/piuparts/basetgz/sid.tar.gz' '-d' 'sid' '--no-upgrade-test' '--apt' 'libscotchmetis-dev=5.1.12b.dfsg-2'
0m0.0s INFO: Running on: Linux debian-testing 3.9-1-amd64 #1 SMP Debian 3.9.8-1 x86_64
0m0.0s DEBUG: Created temporary directory /var/tmp/tmpvsnc8h
0m0.0s DEBUG: Unpacking /var/cache/piuparts/basetgz/sid.tar.gz into /var/tmp/tmpvsnc8h
0m0.0s DEBUG: Starting command: ['tar', '-C', '/var/tmp/tmpvsnc8h', '-zxf', '/var/cache/piuparts/basetgz/sid.tar.gz']
0m1.4s DEBUG: Command ok: ['tar', '-C', '/var/tmp/tmpvsnc8h', '-zxf', '/var/cache/piuparts/basetgz/sid.tar.gz']
0m1.4s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'mount', '-t', 'proc', 'proc', '/proc']
0m1.4s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'mount', '-t', 'proc', 'proc', '/proc']
0m1.4s DEBUG: sources.list:
deb http://127.0.0.1/debian sid main
deb http://127.0.0.1/debian sid contrib
deb http://127.0.0.1/debian sid non-free
0m1.4s DEBUG: Created policy-rc.d and chmodded it.
0m1.4s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', 'update']
0m7.0s DUMP:
Get:1 http://127.0.0.1 sid InRelease [205 kB]
Get:2 http://127.0.0.1 sid/main amd64 Packages [6398 kB]
Get:3 http://127.0.0.1 sid/contrib amd64 Packages [48.5 kB]
Get:4 http://127.0.0.1 sid/non-free amd64 Packages [84.6 kB]
Get:5 http://127.0.0.1 sid/contrib Translation-en [39.9 kB]
Get:6 http://127.0.0.1 sid/main Translation-en [4246 kB]
Get:7 http://127.0.0.1 sid/non-free Translation-en [72.7 kB]
Fetched 11.1 MB in 4s (2740 kB/s)
Reading package lists...
0m7.0s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', 'update']
0m7.0s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', '-yf', 'dist-upgrade']
0m8.4s DUMP:
Reading package lists...
Building dependency tree...
The following packages will be upgraded:
apt libapt-pkg4.12 libc-bin libc6 multiarch-support
5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 8332 kB of archives.
After this operation, 132 kB of additional disk space will be used.
Get:1 http://127.0.0.1/debian/ sid/main libc-bin amd64 2.17-7 [1298 kB]
Get:2 http://127.0.0.1/debian/ sid/main libc6 amd64 2.17-7 [4624 kB]
Get:3 http://127.0.0.1/debian/ sid/main libapt-pkg4.12 amd64 0.9.9 [926 kB]
Get:4 http://127.0.0.1/debian/ sid/main apt amd64 0.9.9 [1323 kB]
Get:5 http://127.0.0.1/debian/ sid/main multiarch-support amd64 2.17-7 [160 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 8332 kB in 0s (39.7 MB/s)
(Reading database ... 6639 files and directories currently installed.)
Preparing to replace libc-bin 2.17-6 (using .../libc-bin_2.17-7_amd64.deb) ...
Unpacking replacement libc-bin ...
Setting up libc-bin (2.17-7) ...
(Reading database ... 6639 files and directories currently installed.)
Preparing to replace libc6:amd64 2.17-6 (using .../libc6_2.17-7_amd64.deb) ...
Unpacking replacement libc6:amd64 ...
Setting up libc6:amd64 (2.17-7) ...
Processing triggers for libc-bin ...
(Reading database ... 6639 files and directories currently installed.)
Preparing to replace libapt-pkg4.12:amd64 0.9.8.2 (using .../libapt-pkg4.12_0.9.9_amd64.deb) ...
Unpacking replacement libapt-pkg4.12:amd64 ...
Setting up libapt-pkg4.12:amd64 (0.9.9) ...
Processing triggers for libc-bin ...
(Reading database ... 6639 files and directories currently installed.)
Preparing to replace apt 0.9.8.2 (using .../archives/apt_0.9.9_amd64.deb) ...
Unpacking replacement apt ...
Setting up apt (0.9.9) ...
gpg: key B98321F9: "Squeeze Stable Release Key <debian-release@lists.debian.org>" not changed
gpg: key 473041FA: "Debian Archive Automatic Signing Key (6.0/squeeze) <ftpmaster@debian.org>" not changed
gpg: key 65FFB764: "Wheezy Stable Release Key <debian-release@lists.debian.org>" not changed
gpg: key 46925553: "Debian Archive Automatic Signing Key (7.0/wheezy) <ftpmaster@debian.org>" not changed
gpg: Total number processed: 4
gpg: unchanged: 4
(Reading database ... 6639 files and directories currently installed.)
Preparing to replace multiarch-support 2.17-6 (using .../multiarch-support_2.17-7_amd64.deb) ...
Unpacking replacement multiarch-support ...
Setting up multiarch-support (2.17-7) ...
0m8.4s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', '-yf', 'dist-upgrade']
0m8.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /var/tmp/tmpvsnc8h/tmp/scripts/
0m8.4s INFO: Running scripts post_setup
0m8.4s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/post_setup_experimental']
0m8.4s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/post_setup_experimental']
0m8.4s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/post_setup_forbid_home']
0m8.4s DUMP:
Disabling /home
0m8.4s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/post_setup_forbid_home']
0m8.4s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/post_setup_squeeze-backports']
0m8.5s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/post_setup_squeeze-backports']
0m8.5s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', 'clean']
0m8.5s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', 'clean']
0m9.7s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'dpkg', '--get-selections', '*']
0m9.7s DUMP:
apt install
base-files install
base-passwd install
bash install
bsdutils install
coreutils install
dash install
debconf install
debconf-i18n install
debian-archive-keyring install
debianutils install
diffutils install
dpkg install
e2fslibs:amd64 install
e2fsprogs install
eatmydata install
findutils install
gcc-4.7-base:amd64 install
gcc-4.8-base:amd64 install
gnupg install
gpgv install
grep install
gzip install
hostname install
initscripts install
insserv install
libacl1:amd64 install
libapt-pkg4.12:amd64 install
libattr1:amd64 install
libblkid1:amd64 install
libbz2-1.0:amd64 install
libc-bin install
libc6:amd64 install
libcap2:amd64 install
libcomerr2:amd64 install
libdb5.1:amd64 install
libgcc1:amd64 install
liblocale-gettext-perl install
liblzma5:amd64 install
libmount1 install
libncurses5:amd64 install
libpam-modules:amd64 install
libpam-modules-bin install
libpam-runtime install
libpam0g:amd64 install
libpcre3:amd64 install
libreadline6:amd64 install
libselinux1:amd64 install
libsemanage-common install
libsemanage1:amd64 install
libsepol1:amd64 install
libslang2:amd64 install
libss2:amd64 install
libstdc++6:amd64 install
libtext-charwidth-perl install
libtext-iconv-perl install
libtext-wrapi18n-perl install
libtinfo5:amd64 install
libusb-0.1-4:amd64 install
libustr-1.0-1:amd64 install
libuuid1:amd64 install
login install
lsb-base install
mawk install
mount install
multiarch-support install
ncurses-base install
ncurses-bin install
passwd install
perl-base install
readline-common install
sed install
sensible-utils install
sysv-rc install
sysvinit install
sysvinit-utils install
tar install
tzdata install
util-linux install
zlib1g:amd64 install
0m9.7s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'dpkg', '--get-selections', '*']
0m9.7s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'dpkg-divert', '--list']
0m9.7s DUMP:
diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash
diversion of /bin/sh to /bin/sh.distrib by dash
0m9.7s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'dpkg-divert', '--list']
0m9.7s INFO: Starting install/purge
0m9.7s INFO: apt-cache does not know about any of the requested packages
0m9.7s INFO: Running scripts pre_test
0m9.7s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/pre_test_root_password']
0m9.7s DUMP:
Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully
0m9.7s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/pre_test_root_password']
0m9.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/var/tmp/tmpvsnc8h']
0m10.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/var/tmp/tmpvsnc8h']
0m11.0s DEBUG: No broken symlinks as far as we can find.
0m11.0s INFO: Running scripts pre_install
0m11.0s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/pre_install_database-server']
0m11.1s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/pre_install_database-server']
0m11.1s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/pre_install_exceptions']
0m11.1s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/pre_install_exceptions']
0m11.1s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m11.1s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m11.1s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-cache', 'show', 'libscotchmetis-dev']
0m12.4s DUMP:
Package: libscotchmetis-dev
Source: scotch
Version: 5.1.12b.dfsg-2
Installed-Size: 123
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Architecture: amd64
Replaces: libmetis-dev
Depends: libscotch-dev (= 5.1.12b.dfsg-2)
Conflicts: libmetis-dev, libparmetis-dev
Description-en: programs and libraries for graph, mesh and hypergraph partitioning
Scotch/Metis compatility interface, providing a free implementation of the
Metis system for graph partitioning and sparse matrix reordering.
Description-md5: a391c720b80b18263009a2efcd3d5429
Homepage: http://www.labri.fr/perso/pelegrin/scotch/
Description-md5: a391c720b80b18263009a2efcd3d5429
Tag: devel::library, role::devel-lib
Section: libdevel
Priority: extra
Filename: pool/main/s/scotch/libscotchmetis-dev_5.1.12b.dfsg-2_amd64.deb
Size: 30840
MD5sum: 8c5b4b42cc6fdf68950a7a4b4a0ee0c4
SHA1: fe78872ce19e8b274db1bda147cf02d4c499d71d
SHA256: ae5e7ff3a12dc983023de8a79f6d1ec5e07de9adcc54a526aa494dec8a7ee8ed
0m12.4s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-cache', 'show', 'libscotchmetis-dev']
0m12.4s DEBUG: Starting command: ['dpkg-deb', '-b', '--nocheck', '/var/tmp/tmptqcORU/piuparts-depends-dummy']
0m12.4s DUMP:
dpkg-deb: warning: not checking contents of control area
dpkg-deb: building an unknown package in '/var/tmp/tmptqcORU/piuparts-depends-dummy.deb'.
0m12.4s DEBUG: Command ok: ['dpkg-deb', '-b', '--nocheck', '/var/tmp/tmptqcORU/piuparts-depends-dummy']
0m12.4s DEBUG: Copying /var/tmp/tmptqcORU/piuparts-depends-dummy.deb to /var/tmp/tmpvsnc8h/tmp
0m12.4s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb']
0m12.4s DUMP:
Selecting previously unselected package piuparts-depends-dummy.
(Reading database ... 6639 files and directories currently installed.)
Unpacking piuparts-depends-dummy (from tmp/piuparts-depends-dummy.deb) ...
dpkg: dependency problems prevent configuration of piuparts-depends-dummy:
piuparts-depends-dummy depends on libscotch-dev (= 5.1.12b.dfsg-2); however:
Package libscotch-dev is not installed.
dpkg: error processing piuparts-depends-dummy (--install):
dependency problems - leaving unconfigured
Errors were encountered while processing:
piuparts-depends-dummy
0m12.4s DEBUG: Command failed (status=1), but ignoring error: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb']
0m12.4s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', '-yf', 'install']
0m14.3s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
Correcting dependencies... Done
The following extra packages will be installed:
adduser libc-dev-bin libc6-dev libgfortran3 libibverbs-dev libibverbs1
libnuma1 libopenmpi-dev libopenmpi1.3 libquadmath0 libscotch-5.1
libscotch-dev libtorque2 linux-libc-dev mpi-default-dev openmpi-common
zlib1g-dev
Suggested packages:
perl-modules glibc-doc
Recommended packages:
manpages-dev gcc c-compiler
The following NEW packages will be installed:
adduser libc-dev-bin libc6-dev libgfortran3 libibverbs-dev libibverbs1
libnuma1 libopenmpi-dev libopenmpi1.3 libquadmath0 libscotch-5.1
libscotch-dev libtorque2 linux-libc-dev mpi-default-dev openmpi-common
zlib1g-dev
0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded.
1 not fully installed or removed.
Need to get 14.5 MB of archives.
After this operation, 53.8 MB of additional disk space will be used.
Get:1 http://127.0.0.1/debian/ sid/main libquadmath0 amd64 4.8.1-5 [138 kB]
Get:2 http://127.0.0.1/debian/ sid/main libgfortran3 amd64 4.8.1-5 [345 kB]
Get:3 http://127.0.0.1/debian/ sid/main adduser all 3.113+nmu3 [264 kB]
Get:4 http://127.0.0.1/debian/ sid/main libibverbs1 amd64 1.1.7-1 [35.4 kB]
Get:5 http://127.0.0.1/debian/ sid/main libnuma1 amd64 2.0.8-3 [34.5 kB]
Get:6 http://127.0.0.1/debian/ sid/main libtorque2 amd64 2.4.16+dfsg-1 [120 kB]
Get:7 http://127.0.0.1/debian/ sid/main libopenmpi1.3 amd64 1.4.5-1 [1436 kB]
Get:8 http://127.0.0.1/debian/ sid/main libscotch-5.1 amd64 5.1.12b.dfsg-2 [808 kB]
Get:9 http://127.0.0.1/debian/ sid/main openmpi-common all 1.4.5-1 [101 kB]
Get:10 http://127.0.0.1/debian/ sid/main libibverbs-dev amd64 1.1.7-1 [86.1 kB]
Get:11 http://127.0.0.1/debian/ sid/main libopenmpi-dev amd64 1.4.5-1 [2778 kB]
Get:12 http://127.0.0.1/debian/ sid/main mpi-default-dev amd64 1.0.1 [3604 B]
Get:13 http://127.0.0.1/debian/ sid/main libc-dev-bin amd64 2.17-7 [233 kB]
Get:14 http://127.0.0.1/debian/ sid/main linux-libc-dev amd64 3.9.8-1 [854 kB]
Get:15 http://127.0.0.1/debian/ sid/main libc6-dev amd64 2.17-7 [3140 kB]
Get:16 http://127.0.0.1/debian/ sid/main zlib1g-dev amd64 1:1.2.8.dfsg-1 [217 kB]
Get:17 http://127.0.0.1/debian/ sid/main libscotch-dev amd64 5.1.12b.dfsg-2 [3885 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 14.5 MB in 0s (36.6 MB/s)
Selecting previously unselected package libquadmath0:amd64.
(Reading database ... 6639 files and directories currently installed.)
Unpacking libquadmath0:amd64 (from .../libquadmath0_4.8.1-5_amd64.deb) ...
Selecting previously unselected package libgfortran3:amd64.
Unpacking libgfortran3:amd64 (from .../libgfortran3_4.8.1-5_amd64.deb) ...
Selecting previously unselected package adduser.
Unpacking adduser (from .../adduser_3.113+nmu3_all.deb) ...
Selecting previously unselected package libibverbs1.
Unpacking libibverbs1 (from .../libibverbs1_1.1.7-1_amd64.deb) ...
Selecting previously unselected package libnuma1.
Unpacking libnuma1 (from .../libnuma1_2.0.8-3_amd64.deb) ...
Selecting previously unselected package libtorque2.
Unpacking libtorque2 (from .../libtorque2_2.4.16+dfsg-1_amd64.deb) ...
Selecting previously unselected package libopenmpi1.3.
Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.5-1_amd64.deb) ...
Selecting previously unselected package libscotch-5.1.
Unpacking libscotch-5.1 (from .../libscotch-5.1_5.1.12b.dfsg-2_amd64.deb) ...
Selecting previously unselected package openmpi-common.
Unpacking openmpi-common (from .../openmpi-common_1.4.5-1_all.deb) ...
Selecting previously unselected package libibverbs-dev.
Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.7-1_amd64.deb) ...
Selecting previously unselected package libopenmpi-dev.
Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.4.5-1_amd64.deb) ...
Selecting previously unselected package mpi-default-dev.
Unpacking mpi-default-dev (from .../mpi-default-dev_1.0.1_amd64.deb) ...
Selecting previously unselected package libc-dev-bin.
Unpacking libc-dev-bin (from .../libc-dev-bin_2.17-7_amd64.deb) ...
Selecting previously unselected package linux-libc-dev:amd64.
Unpacking linux-libc-dev:amd64 (from .../linux-libc-dev_3.9.8-1_amd64.deb) ...
Selecting previously unselected package libc6-dev:amd64.
Unpacking libc6-dev:amd64 (from .../libc6-dev_2.17-7_amd64.deb) ...
Selecting previously unselected package zlib1g-dev:amd64.
Unpacking zlib1g-dev:amd64 (from .../zlib1g-dev_1%3a1.2.8.dfsg-1_amd64.deb) ...
Selecting previously unselected package libscotch-dev.
Unpacking libscotch-dev (from .../libscotch-dev_5.1.12b.dfsg-2_amd64.deb) ...
Setting up libquadmath0:amd64 (4.8.1-5) ...
Setting up libgfortran3:amd64 (4.8.1-5) ...
Setting up adduser (3.113+nmu3) ...
Setting up libibverbs1 (1.1.7-1) ...
Setting up libnuma1 (2.0.8-3) ...
Setting up libtorque2 (2.4.16+dfsg-1) ...
Setting up libopenmpi1.3 (1.4.5-1) ...
Setting up libscotch-5.1 (5.1.12b.dfsg-2) ...
Setting up openmpi-common (1.4.5-1) ...
Setting up libibverbs-dev (1.1.7-1) ...
Setting up libopenmpi-dev (1.4.5-1) ...
update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode
Setting up mpi-default-dev (1.0.1) ...
Setting up libc-dev-bin (2.17-7) ...
Setting up linux-libc-dev:amd64 (3.9.8-1) ...
Setting up libc6-dev:amd64 (2.17-7) ...
Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-1) ...
Setting up libscotch-dev (5.1.12b.dfsg-2) ...
Setting up piuparts-depends-dummy (0.invalid.0) ...
Processing triggers for libc-bin ...
0m14.3s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', '-yf', 'install']
0m14.3s INFO: Installation of ['tmp/piuparts-depends-dummy.deb'] ok
0m14.3s DEBUG: Removing /var/tmp/tmpvsnc8h/tmp/piuparts-depends-dummy.deb
0m14.3s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'dpkg', '--purge', 'piuparts-depends-dummy']
0m14.4s DUMP:
(Reading database ... 8945 files and directories currently installed.)
Removing piuparts-depends-dummy ...
0m14.4s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'dpkg', '--purge', 'piuparts-depends-dummy']
0m14.4s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', 'clean']
0m14.4s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', 'clean']
0m15.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/var/tmp/tmpvsnc8h']
0m16.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/var/tmp/tmpvsnc8h']
0m17.5s DEBUG: No broken symlinks as far as we can find.
0m17.5s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-cache', 'policy']
0m19.0s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://127.0.0.1/debian/ sid/non-free Translation-en
500 http://127.0.0.1/debian/ sid/main Translation-en
500 http://127.0.0.1/debian/ sid/contrib Translation-en
500 http://127.0.0.1/debian/ sid/non-free amd64 Packages
release o=Debian,a=unstable,n=sid,l=Debian,c=non-free
origin 127.0.0.1
500 http://127.0.0.1/debian/ sid/contrib amd64 Packages
release o=Debian,a=unstable,n=sid,l=Debian,c=contrib
origin 127.0.0.1
500 http://127.0.0.1/debian/ sid/main amd64 Packages
release o=Debian,a=unstable,n=sid,l=Debian,c=main
origin 127.0.0.1
Pinned packages:
0m19.0s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-cache', 'policy']
0m19.0s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-cache', 'policy', 'libscotchmetis-dev']
0m19.0s DUMP:
libscotchmetis-dev:
Installed: (none)
Candidate: 5.1.12b.dfsg-2
Version table:
5.1.12b.dfsg-2 0
500 http://127.0.0.1/debian/ sid/main amd64 Packages
0m19.0s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-cache', 'policy', 'libscotchmetis-dev']
0m19.0s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', '-y', 'install', 'libscotchmetis-dev=5.1.12b.dfsg-2']
0m19.5s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
libscotchmetis-dev
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 30.8 kB of archives.
After this operation, 126 kB of additional disk space will be used.
Get:1 http://127.0.0.1/debian/ sid/main libscotchmetis-dev amd64 5.1.12b.dfsg-2 [30.8 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 30.8 kB in 0s (1311 kB/s)
Selecting previously unselected package libscotchmetis-dev.
(Reading database ... 8945 files and directories currently installed.)
Unpacking libscotchmetis-dev (from .../libscotchmetis-dev_5.1.12b.dfsg-2_amd64.deb) ...
Setting up libscotchmetis-dev (5.1.12b.dfsg-2) ...
0m19.5s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'apt-get', '-y', 'install', 'libscotchmetis-dev=5.1.12b.dfsg-2']
0m19.5s INFO: Running scripts post_install
0m19.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/var/tmp/tmpvsnc8h']
0m20.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/var/tmp/tmpvsnc8h']
0m21.3s ERROR: FAIL: Broken symlinks:
/usr/lib/metis-int64/libmetis.a -> libscotchmetis.a
/usr/lib/metis-int64/libmetis.so -> libscotchmetis.so
/usr/lib/metis-int32/libmetis.a -> libscotchmetis.a
/usr/lib/metis-int32/libmetis.so -> libscotchmetis.so
/usr/lib/metis-long/libmetis.a -> libscotchmetis.a
/usr/lib/metis-long/libmetis.so -> libscotchmetis.so
0m21.8s DEBUG: Starting command: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'umount', '/proc']
0m21.8s DEBUG: Command ok: ['chroot', '/var/tmp/tmpvsnc8h', 'eatmydata', 'umount', '/proc']
0m21.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/var/tmp/tmpvsnc8h']
0m21.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/var/tmp/tmpvsnc8h']
0m21.9s DEBUG: Removed directory tree at /var/tmp/tmpvsnc8h
0m21.9s ERROR: piuparts run ends.
ret=1
End: 2013-07-05 21:54:07 EST
Information forwarded
to debian-bugs-dist@lists.debian.org, Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>:
Bug#715112; Package libscotchmetis-dev.
(Sat, 06 Jul 2013 06:06:09 GMT) (full text, mbox, link).
Acknowledgement sent
to Steve Langasek <vorlon@debian.org>:
Extra info received and forwarded to list. Copy sent to Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>.
(Sat, 06 Jul 2013 06:06:09 GMT) (full text, mbox, link).
Message #10 received at 715112@bugs.debian.org (full text, mbox, reply):
[Message part 1 (text/plain, inline)]
Control: severity 715110 normal Control: severity 715122 normal On Sat, Jul 06, 2013 at 05:01:15AM +0000, David Steele wrote: > Package: libsamba-util-dev > Version: 4.0.0~beta2+dfsg1-3.2 > Severity: serious > User: debian-qa@lists.debian.org > Usertags: piuparts, broken-symlink, broken-symlink-shared-library > During a test with piuparts, I noticed your package is > responsible for the presence of broken symlinks involving > a shared library. Such failures may indicate a significant > problem with the package. "serious" when there's a grand total of 0 packages that use this -dev package for linking against the library? Not hardly. I think this severity: serious mass-bug filing is extremely poorly conceived. The fact that these bugs have evaded notice until a lintian check was added means that they do *not* have a high impact on the quality of the release. If they did, they would have turned up already by way of archive rebuild testing. > This is being filed as Serious because it represents a violation > of Policy. Section 8 states "Packages containing shared > libraries must be constructed with a little care to make sure > that the shared library is always available". The packages you've filed bugs against do *not* contain shared libraries. This is a completely bogus justification for a severity serious bug. You also did not achieve a consensus on debian-devel in favor of this mass bug filing before reporting these bugs. At least one person objected to you filing these at severity: serious; another objected to this being considered an error at all. https://lists.debian.org/debian-devel/2013/07/msg00115.html While in the case of these two bug reports it's definitely a bug in the packages and should be fixed, it's nowhere near severity: serious. I suspect most of the other bugs are similar. Please downgrade the bugs from your MBF to a more appropriate severity. -- Steve Langasek Give me a lever long enough and a Free OS Debian Developer to set it on, and I can move the world. Ubuntu Developer http://www.debian.org/ slangasek@ubuntu.com vorlon@debian.org
[signature.asc (application/pgp-signature, inline)]
Information forwarded
to debian-bugs-dist@lists.debian.org, Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>:
Bug#715112; Package libscotchmetis-dev.
(Sat, 06 Jul 2013 08:15:13 GMT) (full text, mbox, link).
Acknowledgement sent
to Dave Steele <dsteele@gmail.com>:
Extra info received and forwarded to list. Copy sent to Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>.
(Sat, 06 Jul 2013 08:15:13 GMT) (full text, mbox, link).
Message #15 received at 715112@bugs.debian.org (full text, mbox, reply):
On Sat, Jul 6, 2013 at 2:03 AM, Steve Langasek <vorlon@debian.org> wrote:
> Control: severity 715110 normal
> Control: severity 715122 normal
>
> On Sat, Jul 06, 2013 at 05:01:15AM +0000, David Steele wrote:
>> Package: libsamba-util-dev
>> Version: 4.0.0~beta2+dfsg1-3.2
>> Severity: serious
>> User: debian-qa@lists.debian.org
>> Usertags: piuparts, broken-symlink, broken-symlink-shared-library
>
>> During a test with piuparts, I noticed your package is
>> responsible for the presence of broken symlinks involving
>> a shared library. Such failures may indicate a significant
>> problem with the package.
>
> "serious" when there's a grand total of 0 packages that use this -dev
> package for linking against the library? Not hardly.
>
> I think this severity: serious mass-bug filing is extremely poorly
> conceived. The fact that these bugs have evaded notice until a lintian
> check was added means that they do *not* have a high impact on the quality
> of the release. If they did, they would have turned up already by way of
> archive rebuild testing.
>
I'm sorry you feel this way. I used the Policy-based severity
definitions to come up with 'serious', as I described earlier in the
thread.
The bugs did not evade notice. Piuparts has been tracking this issue
for some time, as a non-failing 'issue'. Affected packages were not
failed only because the very high reverse dependency count of many of
them would have made 90+% of the distribution untestable. The rdep
count has been driven low enough recently that elevating this test has
become viable. The bug filings are a first step in that process.
I wasn't aware of the history of the lintian check.
>> This is being filed as Serious because it represents a violation
>> of Policy. Section 8 states "Packages containing shared
>> libraries must be constructed with a little care to make sure
>> that the shared library is always available".
>
> The packages you've filed bugs against do *not* contain shared libraries.
That's pretty much the point (and a question of semantics).
Take one of the reports for libsamba-util-dev:
/usr/lib/x86_64-linux-gnu/libtevent-util.so
-> libtevent-util.so.0.0.1
# grep libtevent-util samba4-4.0.0~beta2+dfsg1/debian/*
samba4-4.0.0~beta2+dfsg1/debian/libsamba-util0.install:usr/lib/*/libtevent-util.so.*
samba4-4.0.0~beta2+dfsg1/debian/libsamba-util-dev.install:usr/lib/*/libtevent-util.so
... and libsamba-util-dev does not depend on libsamba-util0.
dpkg --contents shows that libsamba-util-dev installs two .so symlinks
that do not resolve to a valid targets.
So, I claim that libsamba-util-dev is purporting to provide two shared
libraries without following through on the contract. That is what I am
calling a serious bug, as defined by Policy.
It looks like the simple fix here is to add a Depends on libsamba-util0.
> You also did not achieve a consensus on debian-devel in favor of this mass
> bug filing before reporting these bugs. At least one person objected to you
> filing these at severity: serious; another objected to this being considered
> an error at all.
>
> https://lists.debian.org/debian-devel/2013/07/msg00115.html
>
> While in the case of these two bug reports it's definitely a bug in the
> packages and should be fixed, it's nowhere near severity: serious. I
> suspect most of the other bugs are similar.
>
> Please downgrade the bugs from your MBF to a more appropriate severity.
Again, I am sorry for the confusion. I felt I had achieved consensus,
as evidenced by a quieting of the thread, and no attempts at rebutting
the Policy justification.
I guess the next step is a clearer statement of consensus on what to do next.
My position - I believe that the bug submittal, and the current
severity, is appropriate.
I will make changes should consensus dictate. (I may need some help
determining what constitutes consensus).
Information forwarded
to debian-bugs-dist@lists.debian.org, Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>:
Bug#715112; Package libscotchmetis-dev.
(Sat, 06 Jul 2013 09:51:11 GMT) (full text, mbox, link).
Acknowledgement sent
to Julien Cristau <jcristau@debian.org>:
Extra info received and forwarded to list. Copy sent to Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>.
(Sat, 06 Jul 2013 09:51:11 GMT) (full text, mbox, link).
Message #20 received at 715112@bugs.debian.org (full text, mbox, reply):
[Message part 1 (text/plain, inline)]
On Sat, Jul 6, 2013 at 04:10:16 -0400, Dave Steele wrote: > I guess the next step is a clearer statement of consensus on what to do next. > > My position - I believe that the bug submittal, and the current > severity, is appropriate. > > I will make changes should consensus dictate. (I may need some help > determining what constitutes consensus). > Is "please downgrade these bugs to a non-RC severity" clear enough? Cheers, Julien
[signature.asc (application/pgp-signature, inline)]
Information forwarded
to debian-bugs-dist@lists.debian.org, Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>:
Bug#715112; Package libscotchmetis-dev.
(Sat, 06 Jul 2013 17:18:07 GMT) (full text, mbox, link).
Acknowledgement sent
to Dave Steele <dsteele@gmail.com>:
Extra info received and forwarded to list. Copy sent to Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>.
(Sat, 06 Jul 2013 17:18:08 GMT) (full text, mbox, link).
Message #25 received at 715112@bugs.debian.org (full text, mbox, reply):
On Sat, Jul 6, 2013 at 5:48 AM, Julien Cristau <jcristau@debian.org> wrote: > On Sat, Jul 6, 2013 at 04:10:16 -0400, Dave Steele wrote: > >> I guess the next step is a clearer statement of consensus on what to do next. >> >> My position - I believe that the bug submittal, and the current >> severity, is appropriate. >> >> I will make changes should consensus dictate. (I may need some help >> determining what constitutes consensus). >> > Is "please downgrade these bugs to a non-RC severity" clear enough? > The consensus aspect of that is honestly not clear to me. I came into this thinking that the discussion is about what Policy dictates, and the consensus is on what the Policy calls for, based on my reading of the background documentation. If I am wrong on that, I still need to be corrected. -- "Le mieux est l'ennemi du bien" - Voltaire
Severity set to 'normal' from 'serious'
Request was from Dave Steele <dsteele@gmail.com>
to control@bugs.debian.org.
(Sat, 06 Jul 2013 21:57:43 GMT) (full text, mbox, link).
Changed Bug submitter to 'David Steele <steele@debian.org>' from 'David Steele <dsteele@gmail.com>'.
Request was from David Steele <steele@debian.org>
to control@bugs.debian.org.
(Thu, 25 Aug 2016 00:48:13 GMT) (full text, mbox, link).
Reply sent
to Andreas Beckmann <anbe@debian.org>:
You have taken responsibility.
(Wed, 22 Mar 2017 23:06:10 GMT) (full text, mbox, link).
Notification sent
to David Steele <steele@debian.org>:
Bug acknowledged by developer.
(Wed, 22 Mar 2017 23:06:10 GMT) (full text, mbox, link).
Message #34 received at 715112-close@bugs.debian.org (full text, mbox, reply):
Source: scotch
Source-Version: 5.1.12b.dfsg-2.1
We believe that the bug you reported is fixed in the latest version of
scotch, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 715112@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Beckmann <anbe@debian.org> (supplier of updated scotch package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 17 Mar 2017 23:23:06 +0100
Source: scotch
Binary: scotch ptscotch libscotch-dev libptscotch-dev scotch-dbg ptscotch-dbg libscotch-dbg libptscotch-dbg libscotchmetis-dev libscotchparmetis-dev libscotch-5.1 libptscotch-5.1
Architecture: source
Version: 5.1.12b.dfsg-2.1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Changed-By: Andreas Beckmann <anbe@debian.org>
Description:
libptscotch-5.1 - MPI programs and libraries for graph, mesh and hypergraph partiti
libptscotch-dbg - MPI programs and libraries for graph, mesh and hypergraph partiti
libptscotch-dev - MPI programs and libraries for graph, mesh and hypergraph partiti
libscotch-5.1 - programs and libraries for graph, mesh and hypergraph partitionin
libscotch-dbg - programs and libraries for graph, mesh and hypergraph partitionin
libscotch-dev - programs and libraries for graph, mesh and hypergraph partitionin
libscotchmetis-dev - programs and libraries for graph, mesh and hypergraph partitionin
libscotchparmetis-dev - programs and libraries for graph, mesh and hypergraph partitionin
ptscotch - MPI programs and libraries for graph, mesh and hypergraph partiti
ptscotch-dbg - MPI programs and libraries for graph, mesh and hypergraph partiti
scotch - programs and libraries for graph, mesh and hypergraph partitionin
scotch-dbg - programs and libraries for graph, mesh and hypergraph partitionin
Closes: 715107 715112 787997 816109 835019
Changes:
scotch (5.1.12b.dfsg-2.1) unstable; urgency=medium
.
* Non-maintainer upload.
* Drop DMUA.
* Remove Christophe Prud'homme from Uploaders. (Closes: #835019)
* libptscotch-5.1: Fix library installation path. (Closes: #715107)
* libscotchmetis-dev: Fix libmetis.* -> libscotchmetis.* links.
* libscotchparmetis-dev: Fix libparmetis.* -> libptscotchparmetis.* links.
(Closes: #715112, #816109)
* Make package build reproducibly, thanks to Dhole. (Closes: #787997)
Checksums-Sha1:
efb911c277f29f58d2e69f24bd2821a7116b2460 2739 scotch_5.1.12b.dfsg-2.1.dsc
2e7d6ddbaf6bfdd8ca71133cc2a1a6012921fed7 21880 scotch_5.1.12b.dfsg-2.1.debian.tar.xz
642b7313754e3d6e82a4acf7702b7f2ad06f6de2 5275 scotch_5.1.12b.dfsg-2.1_source.buildinfo
Checksums-Sha256:
f4eba6df8238983448c261b94c36f8ee736b29a848cbffe4842132e81b0253f0 2739 scotch_5.1.12b.dfsg-2.1.dsc
6b43ded362bd66f031306934747a7d93b278a3b0392a63ab57be00664134adcc 21880 scotch_5.1.12b.dfsg-2.1.debian.tar.xz
c215aeb14c250e38063a6e1154f7bd15a74463d16b57e0496bb6b4171a017694 5275 scotch_5.1.12b.dfsg-2.1_source.buildinfo
Files:
dfde5ea58116e8ac177635cf787cbff8 2739 math extra scotch_5.1.12b.dfsg-2.1.dsc
0219b4a0766c2a89b2790086bcce6d77 21880 math extra scotch_5.1.12b.dfsg-2.1.debian.tar.xz
2dd1fc56a84c7fcd3a86b6873d0c7b07 5275 math extra scotch_5.1.12b.dfsg-2.1_source.buildinfo
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Bug archived.
Request was from Debbugs Internal Request <owner@bugs.debian.org>
to internal_control@bugs.debian.org.
(Sat, 22 Apr 2017 07:25:13 GMT) (full text, mbox, link).
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