Debian Bug report logs - #584607
libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"

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Package: binutils-gold; Maintainer for binutils-gold is Matthias Klose <doko@debian.org>; Source for binutils-gold is src:binutils.

Reported by: Nicolás Alvarez <nicolas.alvarez@gmail.com>

Date: Sat, 5 Jun 2010 01:12:01 UTC

Severity: important

Found in versions binutils/2.20.51.20100527-1, binutils/2.20.1-10

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Report forwarded to debian-bugs-dist@lists.debian.org, nicolas.alvarez@gmail.com, GNU Libc Maintainers <debian-glibc@lists.debian.org>:
Bug#584607; Package libc6. (Sat, 05 Jun 2010 01:12:04 GMT) Full text and rfc822 format available.

Acknowledgement sent to Nicolás Alvarez <nicolas.alvarez@gmail.com>:
New Bug report received and forwarded. Copy sent to nicolas.alvarez@gmail.com, GNU Libc Maintainers <debian-glibc@lists.debian.org>. (Sat, 05 Jun 2010 01:12:04 GMT) Full text and rfc822 format available.

Message #5 received at submit@bugs.debian.org (full text, mbox):

From: Nicolás Alvarez <nicolas.alvarez@gmail.com>
To: Debian Bug Tracking System <submit@bugs.debian.org>
Subject: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Fri, 04 Jun 2010 22:08:06 -0300
Package: libc6
Version: 2.11.1-2
Severity: important

I'm using a Debian testing/unstable mix. Most packages are from testing
(squeeze). Today, I upgraded to libc from 2.10.2-9 to the version from
unstable (2.11.1-2). After the upgrade, autoconf-generated configure
scripts stopped working. They hang on this step:

[...]
checking whether a program can dlopen itself... yes
checking whether a statically linked program can dlopen itself...

Looking at 'top', the 'conftest' process is using 100% CPU.

Running the test tool manually under strace shows only this output:

execve("./conftest", ["./conftest"], [/* 39 vars */]) = 0
uname({sys="Linux", node="tahu", ...})  = 0
brk(0)                                  = 0x170d000
brk(0x170e150)                          = 0x170e150
arch_prctl(ARCH_SET_FS, 0x170d850)      = 0
brk(0x172f150)                          = 0x172f150
brk(0x1730000)                          = 0x1730000

Then it starts using 100% CPU and doesn't print anything else.

Rebooting the system didn't help. Downgrading back to 2.10.2-9 made it
work immediately, after running configure again (the saved conftest
still hangs, since it's statically linked to libc).

-- System Information:
Debian Release: squeeze/sid
  APT prefers testing
  APT policy: (990, 'testing'), (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.32-3-amd64 (SMP w/2 CPU cores)
Locale: LANG=es_AR.UTF-8, LC_CTYPE=es_AR.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages libc6 depends on:
ii  libc-bin                2.11.1-2         Embedded GNU C Library: Binaries
ii  libgcc1                 1:4.5-20100404-1 GCC support library

libc6 recommends no packages.

Versions of packages libc6 suggests:
ii  debconf [debconf-2.0]         1.5.32     Debian configuration management sy
pn  glibc-doc                     <none>     (no description available)
ii  locales                       2.11.1-2   Embedded GNU C Library: National L

-- debconf information excluded




Information forwarded to debian-bugs-dist@lists.debian.org, GNU Libc Maintainers <debian-glibc@lists.debian.org>:
Bug#584607; Package libc6. (Sat, 05 Jun 2010 01:57:03 GMT) Full text and rfc822 format available.

Acknowledgement sent to Clint Adams <schizo@debian.org>:
Extra info received and forwarded to list. Copy sent to GNU Libc Maintainers <debian-glibc@lists.debian.org>. (Sat, 05 Jun 2010 01:57:03 GMT) Full text and rfc822 format available.

Message #10 received at 584607@bugs.debian.org (full text, mbox):

From: Clint Adams <schizo@debian.org>
To: Nicolás Alvarez <nicolas.alvarez@gmail.com>, 584607@bugs.debian.org
Subject: Re: Bug#584607: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Sat, 5 Jun 2010 01:53:10 +0000
On Fri, Jun 04, 2010 at 10:08:06PM -0300, Nicolás Alvarez wrote:
> I'm using a Debian testing/unstable mix. Most packages are from testing
> (squeeze). Today, I upgraded to libc from 2.10.2-9 to the version from
> unstable (2.11.1-2). After the upgrade, autoconf-generated configure
> scripts stopped working. They hang on this step:
> 
> [...]
> checking whether a program can dlopen itself... yes
> checking whether a statically linked program can dlopen itself...

I cannot reproduce this.  Could you be more specific about which configure
script is involved?




Information forwarded to debian-bugs-dist@lists.debian.org, GNU Libc Maintainers <debian-glibc@lists.debian.org>:
Bug#584607; Package libc6. (Sat, 05 Jun 2010 02:21:03 GMT) Full text and rfc822 format available.

Acknowledgement sent to Nicolás Alvarez <nicolas.alvarez@gmail.com>:
Extra info received and forwarded to list. Copy sent to GNU Libc Maintainers <debian-glibc@lists.debian.org>. (Sat, 05 Jun 2010 02:21:03 GMT) Full text and rfc822 format available.

Message #15 received at 584607@bugs.debian.org (full text, mbox):

From: Nicolás Alvarez <nicolas.alvarez@gmail.com>
To: 584607@bugs.debian.org
Subject: Re: Bug#584607: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Fri, 4 Jun 2010 23:15:56 -0300
[Message part 1 (text/plain, inline)]
On 6/4/10, Clint Adams <schizo@debian.org> wrote:
> On Fri, Jun 04, 2010 at 10:08:06PM -0300, Nicolás Alvarez wrote:
>> I'm using a Debian testing/unstable mix. Most packages are from testing
>> (squeeze). Today, I upgraded to libc from 2.10.2-9 to the version from
>> unstable (2.11.1-2). After the upgrade, autoconf-generated configure
>> scripts stopped working. They hang on this step:
>>
>> [...]
>> checking whether a program can dlopen itself... yes
>> checking whether a statically linked program can dlopen itself...
>
> I cannot reproduce this.  Could you be more specific about which configure
> script is involved?

Attached is the conftest.c that is being compiled by configure (after
manually replacing the #include "confdefs.h" with the contents of that
file). Compiler flags used:

gcc -o conftest -g -O2  -DHAVE_DLFCN_H  -Wl,--export-dynamic -static
conftest.c -ldl

-- 
Nicolas
[conftest.c (text/x-csrc, attachment)]

Information forwarded to debian-bugs-dist@lists.debian.org, GNU Libc Maintainers <debian-glibc@lists.debian.org>:
Bug#584607; Package libc6. (Sat, 05 Jun 2010 02:36:03 GMT) Full text and rfc822 format available.

Acknowledgement sent to Clint Adams <schizo@debian.org>:
Extra info received and forwarded to list. Copy sent to GNU Libc Maintainers <debian-glibc@lists.debian.org>. (Sat, 05 Jun 2010 02:36:03 GMT) Full text and rfc822 format available.

Message #20 received at 584607@bugs.debian.org (full text, mbox):

From: Clint Adams <schizo@debian.org>
To: Nicolás Alvarez <nicolas.alvarez@gmail.com>
Cc: 584607@bugs.debian.org
Subject: Re: Bug#584607: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Sat, 5 Jun 2010 02:32:57 +0000
On Fri, Jun 04, 2010 at 11:01:11PM -0300, Nicolás Alvarez wrote:
> gcc -o conftest -g -O2  -DHAVE_DLFCN_H  -Wl,--export-dynamic -static
> conftest.c -ldl

% gcc -o conftest -g -O2  -DHAVE_DLFCN_H  -Wl,--export-dynamic -static conftest.c -ldl
/tmp/cc5vF3ae.o: In function `main':
/tmp/conftest.c:56: warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking
/usr/bin/ld: dynamic STT_GNU_IFUNC symbol `strcmp' with pointer equality in `/usr/lib/gcc/x86_64-linux-gnu/4.4.4/../../../../lib/libc.a(strcmp.o)' can not be used when making an executable; recompile with -fPIE and relink with -pie
collect2: ld returned 1 exit status


What gcc and binutils are you using?




Information forwarded to debian-bugs-dist@lists.debian.org, GNU Libc Maintainers <debian-glibc@lists.debian.org>:
Bug#584607; Package libc6. (Sat, 05 Jun 2010 03:06:03 GMT) Full text and rfc822 format available.

Acknowledgement sent to Nicolás Alvarez <nicolas.alvarez@gmail.com>:
Extra info received and forwarded to list. Copy sent to GNU Libc Maintainers <debian-glibc@lists.debian.org>. (Sat, 05 Jun 2010 03:06:03 GMT) Full text and rfc822 format available.

Message #25 received at 584607@bugs.debian.org (full text, mbox):

From: Nicolás Alvarez <nicolas.alvarez@gmail.com>
To: Clint Adams <schizo@debian.org>
Cc: 584607@bugs.debian.org
Subject: Re: Bug#584607: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Sat, 5 Jun 2010 00:02:47 -0300
On 6/4/10, Clint Adams <schizo@debian.org> wrote:
> On Fri, Jun 04, 2010 at 11:01:11PM -0300, Nicolás Alvarez wrote:
>> gcc -o conftest -g -O2  -DHAVE_DLFCN_H  -Wl,--export-dynamic -static
>> conftest.c -ldl
>
> % gcc -o conftest -g -O2  -DHAVE_DLFCN_H  -Wl,--export-dynamic -static
> conftest.c -ldl
> /tmp/cc5vF3ae.o: In function `main':
> /tmp/conftest.c:56: warning: Using 'dlopen' in statically linked
> applications requires at runtime the shared libraries from the glibc version
> used for linking
> /usr/bin/ld: dynamic STT_GNU_IFUNC symbol `strcmp' with pointer equality in
> `/usr/lib/gcc/x86_64-linux-gnu/4.4.4/../../../../lib/libc.a(strcmp.o)' can
> not be used when making an executable; recompile with -fPIE and relink with
> -pie
> collect2: ld returned 1 exit status
>
>
> What gcc and binutils are you using?

gcc (Debian 4.4.4-1) 4.4.4
GNU gold (GNU Binutils for Debian 2.20.1-system.20100303) 1.9

-- 
Nicolas




Information forwarded to debian-bugs-dist@lists.debian.org, GNU Libc Maintainers <debian-glibc@lists.debian.org>:
Bug#584607; Package libc6. (Sat, 05 Jun 2010 03:48:03 GMT) Full text and rfc822 format available.

Acknowledgement sent to Nicolás Alvarez <nicolas.alvarez@gmail.com>:
Extra info received and forwarded to list. Copy sent to GNU Libc Maintainers <debian-glibc@lists.debian.org>. (Sat, 05 Jun 2010 03:48:03 GMT) Full text and rfc822 format available.

Message #30 received at 584607@bugs.debian.org (full text, mbox):

From: Nicolás Alvarez <nicolas.alvarez@gmail.com>
To: 584607@bugs.debian.org
Cc: Clint Adams <schizo@debian.org>
Subject: Re: Bug#584607: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Sat, 5 Jun 2010 00:45:33 -0300
On 6/4/10, Clint Adams <schizo@debian.org> wrote:
> On Fri, Jun 04, 2010 at 10:08:06PM -0300, Nicolás Alvarez wrote:
>> I'm using a Debian testing/unstable mix. Most packages are from testing
>> (squeeze). Today, I upgraded to libc from 2.10.2-9 to the version from
>> unstable (2.11.1-2). After the upgrade, autoconf-generated configure
>> scripts stopped working. They hang on this step:
>>
>> [...]
>> checking whether a program can dlopen itself... yes
>> checking whether a statically linked program can dlopen itself...
>
> I cannot reproduce this.  Could you be more specific about which configure
> script is involved?

This seems enough to reproduce.

configure.ac:
AC_INIT(bug584607, 0.1)
AM_INIT_AUTOMAKE(foreign)
AC_LIBTOOL_DLOPEN
LT_INIT
AC_CONFIG_FILES([Makefile])

Makefile.am:
bin_SCRIPTS=x

Run autoreconf -i && ./configure.

-- 
Nicolas




Information forwarded to debian-bugs-dist@lists.debian.org, GNU Libc Maintainers <debian-glibc@lists.debian.org>:
Bug#584607; Package libc6. (Sat, 05 Jun 2010 10:45:03 GMT) Full text and rfc822 format available.

Acknowledgement sent to Aurelien Jarno <aurelien@aurel32.net>:
Extra info received and forwarded to list. Copy sent to GNU Libc Maintainers <debian-glibc@lists.debian.org>. (Sat, 05 Jun 2010 10:45:03 GMT) Full text and rfc822 format available.

Message #35 received at 584607@bugs.debian.org (full text, mbox):

From: Aurelien Jarno <aurelien@aurel32.net>
To: Nicolás Alvarez <nicolas.alvarez@gmail.com>, 584607@bugs.debian.org
Cc: Clint Adams <schizo@debian.org>
Subject: Re: Bug#584607: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Sat, 5 Jun 2010 12:43:03 +0200
On Sat, Jun 05, 2010 at 12:45:33AM -0300, Nicolás Alvarez wrote:
> On 6/4/10, Clint Adams <schizo@debian.org> wrote:
> > On Fri, Jun 04, 2010 at 10:08:06PM -0300, Nicolás Alvarez wrote:
> >> I'm using a Debian testing/unstable mix. Most packages are from testing
> >> (squeeze). Today, I upgraded to libc from 2.10.2-9 to the version from
> >> unstable (2.11.1-2). After the upgrade, autoconf-generated configure
> >> scripts stopped working. They hang on this step:
> >>
> >> [...]
> >> checking whether a program can dlopen itself... yes
> >> checking whether a statically linked program can dlopen itself...
> >
> > I cannot reproduce this.  Could you be more specific about which configure
> > script is involved?
> 
> This seems enough to reproduce.
> 
> configure.ac:
> AC_INIT(bug584607, 0.1)
> AM_INIT_AUTOMAKE(foreign)
> AC_LIBTOOL_DLOPEN
> LT_INIT
> AC_CONFIG_FILES([Makefile])
> 
> Makefile.am:
> bin_SCRIPTS=x
> 
> Run autoreconf -i && ./configure.
> 

You also need to have binutils gold instead of the default binutils.

-- 
Aurelien Jarno	                        GPG: 1024D/F1BCDB73
aurelien@aurel32.net                 http://www.aurel32.net




Information forwarded to debian-bugs-dist@lists.debian.org, GNU Libc Maintainers <debian-glibc@lists.debian.org>:
Bug#584607; Package libc6. (Sun, 06 Jun 2010 14:00:02 GMT) Full text and rfc822 format available.

Acknowledgement sent to Aurelien Jarno <aurelien@aurel32.net>:
Extra info received and forwarded to list. Copy sent to GNU Libc Maintainers <debian-glibc@lists.debian.org>. (Sun, 06 Jun 2010 14:00:02 GMT) Full text and rfc822 format available.

Message #40 received at 584607@bugs.debian.org (full text, mbox):

From: Aurelien Jarno <aurelien@aurel32.net>
To: Nicolás Alvarez <nicolas.alvarez@gmail.com>, 584607@bugs.debian.org
Cc: Clint Adams <schizo@debian.org>
Subject: Re: Bug#584607: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Sun, 6 Jun 2010 15:57:45 +0200
reassign 584607 binutils-gold
thanks

On Sat, Jun 05, 2010 at 12:02:47AM -0300, Nicolás Alvarez wrote:
> On 6/4/10, Clint Adams <schizo@debian.org> wrote:
> > On Fri, Jun 04, 2010 at 11:01:11PM -0300, Nicolás Alvarez wrote:
> >> gcc -o conftest -g -O2  -DHAVE_DLFCN_H  -Wl,--export-dynamic -static
> >> conftest.c -ldl
> >
> > % gcc -o conftest -g -O2  -DHAVE_DLFCN_H  -Wl,--export-dynamic -static
> > conftest.c -ldl
> > /tmp/cc5vF3ae.o: In function `main':
> > /tmp/conftest.c:56: warning: Using 'dlopen' in statically linked
> > applications requires at runtime the shared libraries from the glibc version
> > used for linking
> > /usr/bin/ld: dynamic STT_GNU_IFUNC symbol `strcmp' with pointer equality in
> > `/usr/lib/gcc/x86_64-linux-gnu/4.4.4/../../../../lib/libc.a(strcmp.o)' can
> > not be used when making an executable; recompile with -fPIE and relink with
> > -pie
> > collect2: ld returned 1 exit status
> >
> >
> > What gcc and binutils are you using?
> 
> gcc (Debian 4.4.4-1) 4.4.4
> GNU gold (GNU Binutils for Debian 2.20.1-system.20100303) 1.9
> 

This is definitely a bug of binutils-gold, which doesn't seem to cope
well with STT_GNU_IFUNC symbols. The problem doesn't exists for a glibc
built without multiarch support.

I advise you to uninstall this package until the bug is fixed. Meanwhile
I am reassigning the bug to binutils-gold.

-- 
Aurelien Jarno                          GPG: 1024D/F1BCDB73
aurelien@aurel32.net                 http://www.aurel32.net




Bug reassigned from package 'libc6' to 'binutils-gold'. Request was from Aurelien Jarno <aurelien@aurel32.net> to control@bugs.debian.org. (Sun, 06 Jun 2010 14:03:06 GMT) Full text and rfc822 format available.

Bug No longer marked as found in versions eglibc/2.11.1-2. Request was from Aurelien Jarno <aurelien@aurel32.net> to control@bugs.debian.org. (Sun, 06 Jun 2010 14:03:07 GMT) Full text and rfc822 format available.

Bug Marked as found in versions binutils/2.20.51.20100527-1. Request was from Aurelien Jarno <aurel32@debian.org> to control@bugs.debian.org. (Sun, 06 Jun 2010 14:21:10 GMT) Full text and rfc822 format available.

Bug Marked as found in versions binutils/2.20.1-10. Request was from Aurelien Jarno <aurel32@debian.org> to control@bugs.debian.org. (Sun, 06 Jun 2010 14:21:12 GMT) Full text and rfc822 format available.

Information forwarded to debian-bugs-dist@lists.debian.org, Matthias Klose <doko@debian.org>:
Bug#584607; Package binutils-gold. (Sun, 06 Jun 2010 18:39:14 GMT) Full text and rfc822 format available.

Acknowledgement sent to Nicolás Alvarez <nicolas.alvarez@gmail.com>:
Extra info received and forwarded to list. Copy sent to Matthias Klose <doko@debian.org>. (Sun, 06 Jun 2010 18:39:14 GMT) Full text and rfc822 format available.

Message #53 received at 584607@bugs.debian.org (full text, mbox):

From: Nicolás Alvarez <nicolas.alvarez@gmail.com>
To: 584607@bugs.debian.org
Subject: Re: Bug#584607: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Sun, 6 Jun 2010 15:34:21 -0300
On 6/6/10, Aurelien Jarno <aurelien@aurel32.net> wrote:
> reassign 584607 binutils-gold
> thanks
>
> On Sat, Jun 05, 2010 at 12:02:47AM -0300, Nicolás Alvarez wrote:
>> On 6/4/10, Clint Adams <schizo@debian.org> wrote:
>> > What gcc and binutils are you using?
>>
>> gcc (Debian 4.4.4-1) 4.4.4
>> GNU gold (GNU Binutils for Debian 2.20.1-system.20100303) 1.9
>>
>
> This is definitely a bug of binutils-gold, which doesn't seem to cope
> well with STT_GNU_IFUNC symbols. The problem doesn't exists for a glibc
> built without multiarch support.
>
> I advise you to uninstall this package until the bug is fixed. Meanwhile
> I am reassigning the bug to binutils-gold.

Thanks. I confirm that re-upgrading libc and removing binutils-gold
gets rid of the problem too.

I'll survive with slower linking for a while :)

-- 
Nicolas




Information forwarded to debian-bugs-dist@lists.debian.org, Matthias Klose <doko@debian.org>:
Bug#584607; Package binutils-gold. (Sun, 22 Aug 2010 09:27:05 GMT) Full text and rfc822 format available.

Acknowledgement sent to Sebastian Dröge <slomo@circular-chaos.org>:
Extra info received and forwarded to list. Copy sent to Matthias Klose <doko@debian.org>. (Sun, 22 Aug 2010 09:27:05 GMT) Full text and rfc822 format available.

Message #58 received at 584607@bugs.debian.org (full text, mbox):

From: Sebastian Dröge <slomo@circular-chaos.org>
To: 584607@bugs.debian.org
Subject: Re: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Sun, 22 Aug 2010 11:24:44 +0200
[Message part 1 (text/plain, inline)]
Hi,
are there any news on this? This still happens with latest binutils,
libc and gcc on sid. Is gold upstream aware of this?
[signature.asc (application/pgp-signature, inline)]

Information forwarded to debian-bugs-dist@lists.debian.org, Matthias Klose <doko@debian.org>:
Bug#584607; Package binutils-gold. (Sun, 28 Jul 2013 18:00:04 GMT) Full text and rfc822 format available.

Acknowledgement sent to Kamaraju Kusumanchi <kamaraju@gmail.com>:
Extra info received and forwarded to list. Copy sent to Matthias Klose <doko@debian.org>. (Sun, 28 Jul 2013 18:00:04 GMT) Full text and rfc822 format available.

Message #63 received at 584607@bugs.debian.org (full text, mbox):

From: Kamaraju Kusumanchi <kamaraju@gmail.com>
To: 584607@bugs.debian.org
Cc: nicolas.alvarez@gmail.com, schizo@debian.org, aurelien@aurel32.net, slomo@circular-chaos.org
Subject: Re: Bug#584607: libc6: autoconf configure scripts hang at "checking whether a statically linked program can dlopen itself"
Date: Sun, 28 Jul 2013 13:56:49 -0400
[Message part 1 (text/plain, inline)]
I am getting the same error as Clint Adams (Message 20) with just bintuils
(and without binutils-gold)


rajulocal@hogwarts:~/x$ cat test.c
int main(int argc, char **argv)
{
    return 0;
}

rajulocal@hogwarts:~/x$ gcc -static -Wl,--export-dynamic test.c
/usr/bin/ld: dynamic STT_GNU_IFUNC symbol `strcmp' with pointer equality in
`/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/libc.a(strcmp.o)'
can not be used when making an executable; recompile with -fPIE and relink
with -pie
collect2: error: ld returned 1 exit status

rajulocal@hogwarts:~/x$ dpkg -l gcc binutils libc6
ii  binutils
2.22-8                       amd64                        GNU assembler,
linker and binary utilities
ii  gcc
4:4.7.2-1                    amd64                        GNU C compiler
ii  libc6:amd64
2.13-38                      amd64                        Embedded GNU C
Library: Shared libraries
ii  libc6:i386
2.13-38                      i386                         Embedded GNU C
Library: Shared libraries

rajulocal@hogwarts:~/x$ uname -a
Linux hogwarts 3.2.0-4-amd64 #1 SMP Debian 3.2.39-2 x86_64 GNU/Linux

This machine is a mixture of Debian Wheezy and Squeeze.
-- 
Kamaraju S. Kusumanchi
http://malayamaarutham.blogspot.com/
[Message part 2 (text/html, inline)]

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