Debian Bug report logs - #470293
python-numpy: bug in numpy.histogram

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Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: Manuel Metz <mmetz@astro.uni-bonn.de>

To: Debian Bug Tracking System <submit@bugs.debian.org>

Subject: python-numpy: bug in numpy.histogram

Date: Mon, 10 Mar 2008 15:10:25 +0100

Package: python-numpy
Version: 1:1.0.4-6
Severity: important
Tags: patch


There is a bug in site-packages/numpy/lib/function_base.py, line 154

The line is 
  if(any(bins[1:]-bins[:-1] < 0)):
which causes an error
  NameError: global name 'any' is not defined


It should be:
  if(bins[1:]-bins[:-1] < 0).any():

see also
  http://www.mail-archive.com/numpy-discussion@scipy.org/msg06746.html


-- System Information:
Debian Release: lenny/sid
  APT prefers oldstable
  APT policy: (500, 'oldstable'), (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.24.3 (SMP w/2 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

Versions of packages python-numpy depends on:
ii  libblas3gf [libblas.so.3gf 1.2-1.5       Basic Linear Algebra Subroutines 3
ii  libc6                      2.7-9         GNU C Library: Shared libraries
ii  libgcc1                    1:4.3.0~rc2-1 GCC support library
ii  libgfortran3               4.3.0~rc2-1   Runtime library for GNU Fortran ap
ii  liblapack3gf [liblapack.so 3.1.1-0.4     library of linear algebra routines
ii  python                     2.4.4-6       An interactive high-level object-o
ii  python-central             0.5.15-0.1    register and build utility for Pyt

python-numpy recommends no packages.

-- no debconf information

Message #10 received at 470293@bugs.debian.org (full text, mbox, reply):

From: "Ondrej Certik" <ondrej@certik.cz>

To: "Manuel Metz" <mmetz@astro.uni-bonn.de>, 470293@bugs.debian.org

Subject: Re: Bug#470293: python-numpy: bug in numpy.histogram

Date: Mon, 10 Mar 2008 15:38:04 +0100

On Mon, Mar 10, 2008 at 3:10 PM, Manuel Metz <mmetz@astro.uni-bonn.de> wrote:
> Package: python-numpy
>  Version: 1:1.0.4-6
>  Severity: important
>  Tags: patch
>
>
>  There is a bug in site-packages/numpy/lib/function_base.py, line 154
>
>  The line is
>   if(any(bins[1:]-bins[:-1] < 0)):
>  which causes an error
>   NameError: global name 'any' is not defined
>
>
>  It should be:
>   if(bins[1:]-bins[:-1] < 0).any():
>
>  see also
>   http://www.mail-archive.com/numpy-discussion@scipy.org/msg06746.html

Thanks for the bugreport. This is fixed in the upstream svn. Upstream
should release a new version of numpy soon, so then it will be fixed.
If you want to have it fixed earlier, feel free to commit a patch with
this into the numpy debian svn (see the Vcs-svn field) and I'll upload
a new revision. Add it to debian/patches.

Ondrej

Message #15 received at 470293@bugs.debian.org (full text, mbox, reply):

From: Manuel Metz <mmetz@astro.uni-bonn.de>

To: Ondrej Certik <ondrej@certik.cz>

Cc: 470293@bugs.debian.org

Subject: Re: Bug#470293: python-numpy: bug in numpy.histogram

Date: Tue, 11 Mar 2008 16:33:44 +0100

Ondrej Certik wrote:
> On Mon, Mar 10, 2008 at 3:10 PM, Manuel Metz <mmetz@astro.uni-bonn.de> wrote:
>> Package: python-numpy
>>  Version: 1:1.0.4-6
>>  Severity: important
>>  Tags: patch
>>
>>
>>  There is a bug in site-packages/numpy/lib/function_base.py, line 154
>>
>>  The line is
>>   if(any(bins[1:]-bins[:-1] < 0)):
>>  which causes an error
>>   NameError: global name 'any' is not defined
>>
>>
>>  It should be:
>>   if(bins[1:]-bins[:-1] < 0).any():
>>
>>  see also
>>   http://www.mail-archive.com/numpy-discussion@scipy.org/msg06746.html
> 
> Thanks for the bugreport. This is fixed in the upstream svn. Upstream
> should release a new version of numpy soon, so then it will be fixed.
> If you want to have it fixed earlier, feel free to commit a patch with
> this into the numpy debian svn (see the Vcs-svn field) and I'll upload
> a new revision. Add it to debian/patches.
> 
> Ondrej

Hi,
okay, I've seen that there are plans to release numpy 1.0.5 on Wednesday 
(tomorrow). So I think a patch is not needed.

Manuel

Message #22 received at 470293-close@bugs.debian.org (full text, mbox, reply):

From: Ondrej Certik <ondrej@certik.cz>

To: 470293-close@bugs.debian.org

Subject: Bug#470293: fixed in python-numpy 1:1.0.4-8

Date: Wed, 30 Apr 2008 12:17:03 +0000

Source: python-numpy
Source-Version: 1:1.0.4-8

We believe that the bug you reported is fixed in the latest version of
python-numpy, which is due to be installed in the Debian FTP archive:

python-numpy-dbg_1.0.4-8_i386.deb
  to pool/main/p/python-numpy/python-numpy-dbg_1.0.4-8_i386.deb
python-numpy-doc_1.0.4-8_all.deb
  to pool/main/p/python-numpy/python-numpy-doc_1.0.4-8_all.deb
python-numpy-ext_1.0.4-8_all.deb
  to pool/main/p/python-numpy/python-numpy-ext_1.0.4-8_all.deb
python-numpy_1.0.4-8.diff.gz
  to pool/main/p/python-numpy/python-numpy_1.0.4-8.diff.gz
python-numpy_1.0.4-8.dsc
  to pool/main/p/python-numpy/python-numpy_1.0.4-8.dsc
python-numpy_1.0.4-8_i386.deb
  to pool/main/p/python-numpy/python-numpy_1.0.4-8_i386.deb



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 470293@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Ondrej Certik <ondrej@certik.cz> (supplier of updated python-numpy package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


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Format: 1.8
Date: Wed, 30 Apr 2008 13:52:37 +0200
Source: python-numpy
Binary: python-numpy python-numpy-dbg python-numpy-ext python-numpy-doc
Architecture: source all i386
Version: 1:1.0.4-8
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Modules Team <python-modules-team@lists.alioth.debian.org>
Changed-By: Ondrej Certik <ondrej@certik.cz>
Description: 
 python-numpy - Numerical Python adds a fast array facility to the Python languag
 python-numpy-dbg - Fast array facility to the Python language (debug extension)
 python-numpy-doc - NumPy documentation
 python-numpy-ext - NumPy adds a fast array facility to the Python language
Closes: 470293 477243 478496
Changes: 
 python-numpy (1:1.0.4-8) unstable; urgency=medium
 .
   [ Kumar Appaiah ]
   * debian/rules:
     + Add the --single-version-externally-managed flag.
   * debian/patches/03_histogram_fix.diff:
     + Patch from Manuel Metz to fix numpy.histogram. (Closes: #470293)
   * debian/python-numpy.install:
     + Install the egg-info file. (Closes: #477243)
   * debian/control:
     + Update Kumar Appaiah's e-mail address to the debian.org
       address.
 .
   [ Chris AtLee ]
   * debian/control
     + Update description to clarify relationship between numpy and
       python-(numarray|numeric).
 .
   [ Kumar Appaiah ]
   * debian/rules: Fix symlinks for include file location change
     due to pycentral modification. (Closes: #478496)
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