Debian Bug report logs - #1030714
cwltool: please make the build reproducible

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Message #5 received at submit@bugs.debian.org (full text, mbox, reply):

From: "Chris Lamb" <lamby@debian.org>

To: submit@bugs.debian.org

Subject: cwltool: please make the build reproducible

Date: Mon, 06 Feb 2023 09:40:11 -0800

[Message part 1 (text/plain, inline)]

Source: cwltool
Version: 3.1.20230201224320-1
Severity: wishlist
Tags: patch
User: reproducible-builds@lists.alioth.debian.org
Usertags: randomness
X-Debbugs-Cc: reproducible-bugs@lists.alioth.debian.org

Hi,

Whilst working on the Reproducible Builds effort [0] we noticed that
cwltool could not be built reproducibly.

This is because it installs a file (with a nondeterminstic filename)
directly under the /usr/lib/python3/dist-packages directory.

A patch is attached that removes all files (NB. not directories) that
are installed directly under that location (which can never be right).
This, therefore, is a more generic solution to #1030713.

 [0] https://reproducible-builds.org/


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby@debian.org / chris-lamb.co.uk
       `-

[cwltool.diff.txt (text/plain, attachment)]

Message #10 received at 1030714@bugs.debian.org (full text, mbox, reply):

From: FC Stegerman <flx@obfusk.net>

To: 1030714@bugs.debian.org

Subject: Re: Bug#1030714: cwltool: please make the build reproducible

Date: Tue, 7 Feb 2023 06:08:10 +0100

* Chris Lamb <lamby@debian.org> [2023-02-06 18:40]:
> A patch is attached that removes all files (NB. not directories) that
> are installed directly under that location (which can never be right).
> This, therefore, is a more generic solution to #1030713.

> -	find .pybuild -name "out" -type f -delete
> +	find .pybuild -name "out" -type f
> +	find .pybuild/*/build -maxdepth 1 -type f -delete

The patch keeps the original find command, just w/o the -delete, so it
will now print a list of files named "out" instead of deleting them
(or doing anything else with them) before deleting all files in the
build subdirectories; was this intended?

- FC

Message #15 received at 1030714-close@bugs.debian.org (full text, mbox, reply):

From: Debian FTP Masters <ftpmaster@ftp-master.debian.org>

To: 1030714-close@bugs.debian.org

Subject: Bug#1030714: fixed in cwltool 3.1.20230209161050-1

Date: Thu, 09 Feb 2023 18:34:32 +0000

Source: cwltool
Source-Version: 3.1.20230209161050-1
Done: Michael R. Crusoe <crusoe@debian.org>

We believe that the bug you reported is fixed in the latest version of
cwltool, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1030714@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe <crusoe@debian.org> (supplier of updated cwltool package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Thu, 09 Feb 2023 18:18:06 +0100
Source: cwltool
Architecture: source
Version: 3.1.20230209161050-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <crusoe@debian.org>
Closes: 1030713 1030714
Changes:
 cwltool (3.1.20230209161050-1) unstable; urgency=medium
 .
   * New upstream version
     Tests no longer produce side-effects. Closes: #1030713, #1030714
   * Refresh patches.
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 41a9eb8282e7bfab8149ea37bf42fb08676b9179 1138458 cwltool_3.1.20230209161050.orig.tar.gz
 bb3e5037f5f80f3b48eb28cbd41f43654c774d7c 51808 cwltool_3.1.20230209161050-1.debian.tar.xz
 a8461f6669f1bc1a5e60677f0488cdd3966012cc 11706 cwltool_3.1.20230209161050-1_source.buildinfo
Checksums-Sha256:
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 848ee8e1b49675848726a41786f3afb281b3a85131a9ee4028a540fb31fbfc3b 11706 cwltool_3.1.20230209161050-1_source.buildinfo
Files:
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 f7efa4c3fcd1f8a49ccadd90a428fd0e 1138458 science optional cwltool_3.1.20230209161050.orig.tar.gz
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